DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11406 and CG18530

DIOPT Version :10

Sequence 1:NP_001014548.1 Gene:CG11406 / 37877 FlyBaseID:FBgn0034990 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_652714.2 Gene:CG18530 / 59241 FlyBaseID:FBgn0042207 Length:389 Species:Drosophila melanogaster


Alignment Length:393 Identity:138/393 - (35%)
Similarity:201/393 - (51%) Gaps:52/393 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SLCTR---SDSVCQAVQRQQLQCQVHRIETADGYRLSLHRIPAPQNRWCPQQ-LRP-FLLMHGLL 75
            |:||:   ..:..:.:.......::|.:.|.|||.|:..||  |.:.:|.|. .:| .|..||:.
  Fly    10 SVCTQIVNGITSAEIIASHNYPVEIHTVVTRDGYLLNAFRI--PNSIYCEQSGTKPAVLFQHGMT 72

  Fly    76 GSAGDFVSGGRGRSLALELHARCFDVWLANARGTTHSRGHRTLQTSDARFWRFSWHEIGIYDLPA 140
            .|:..|:..|...:|...|...||||||:|:|||.:||.|.:|..||..||||||||||..|:.|
  Fly    73 ASSDVFLVNGPRDALPFMLADACFDVWLSNSRGTRYSRRHVSLDPSDEDFWRFSWHEIGTEDVAA 137

  Fly   141 IVDYVLARTNRRQLHYVGHSQGTTVLLVLLSQRPEYNARFANAALLAPVAFLQH----------- 194
            .:||:|..||:..:||||||||.|.|:||||.|||||.....|.||.|..|:.|           
  Fly   138 FIDYILGTTNQSAVHYVGHSQGCTTLVVLLSMRPEYNQFVKTAILLGPPVFMGHTHTLGQIFLRT 202

  Fly   195 --LSSPPLRLLASDSSMATLLLNKLGLHELLPASALTQVGGQF----FCTASRPTYALCTLFTSV 253
              :|.|....:..:.     :|||:          |.::.|.|    :|:         |.|..|
  Fly   203 LIMSMPDCEFMFHNR-----ILNKI----------LRRICGLFVVRVYCS---------TFFMIV 243

  Fly   254 YVGFSDYPLDRSILPRILETTPAGISRGQLQHFGQLINSGKFQQYDYRSPRLNTLRYGRTTPPSY 318
            ...|||: |:.|.:|.|..|.|||:|..|.:||.||.:||:|:.:|:...| |.:.|...|||.|
  Fly   244 NGKFSDH-LNTSAIPLIAATLPAGVSSRQPKHFIQLTDSGRFRPFDFGILR-NLINYRSLTPPDY 306

  Fly   319 QLANVR--LQLQIFHGSRDTLSSLADVQRLVRELRNSVTQMYQVPGYNHIDFLFASSAPQVVFQR 381
            .|.|||  ..:.||:...|..::..||:.....|..:|......|.::|:||:.:.:...|:.:.
  Fly   307 PLHNVRPLTPVHIFYSDDDLSAAKEDVENFATSLPEAVMHRISTPSWHHMDFVHSMTVANVINKP 371

  Fly   382 IIQ 384
            :|:
  Fly   372 VIE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11406NP_001014548.1 PLN02872 22..384 CDD:215470 134/382 (35%)
CG18530NP_652714.2 PLN02872 22..377 CDD:215470 135/381 (35%)

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