DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11406 and Lip1

DIOPT Version :10

Sequence 1:NP_001014548.1 Gene:CG11406 / 37877 FlyBaseID:FBgn0034990 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_523540.1 Gene:Lip1 / 43973 FlyBaseID:FBgn0023496 Length:439 Species:Drosophila melanogaster


Alignment Length:399 Identity:144/399 - (36%)
Similarity:208/399 - (52%) Gaps:41/399 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EEEEPEEEVARDSLCTRSD-------------SVCQAVQRQQLQCQVHRIETADGYRLSLHRIPA 55
            ||||.|||...|.  |..|             ||.:.:.:...:.:||.:.|.|||.|::|||  
  Fly    37 EEEEEEEESVEDE--TPEDRLQRKNIKQDSTLSVDKLIAKYGYESEVHHVTTEDGYILTMHRI-- 97

  Fly    56 PQNRWCPQQLRPFLLMHGLLGSAGDFVSGGRGRSLALELHARCFDVWLANARGTTHSRGHRTLQT 120
             :.:..|    ||||.|||:.|:..||..|...|||..|....:||||.||||..:||.|.||..
  Fly    98 -RKQGAP----PFLLQHGLVDSSAGFVVMGPNVSLAYLLADHNYDVWLGNARGNRYSRNHTTLDP 157

  Fly   121 SDARFWRFSWHEIGIYDLPAIVDYVLARTNRRQLHYVGHSQGTTVLLVLLSQRPEYNARFANAAL 185
            .:::||.|||||||:|||||::|:||..|...:|||.|||||.|...|:.|.||.||.:..:...
  Fly   158 DESKFWDFSWHEIGMYDLPAMIDHVLKVTGFPKLHYAGHSQGCTSFFVMCSMRPAYNDKVVSMQA 222

  Fly   186 LAPVAFLQHLSSPP-LRLLASDSSMATLLLNKLGLHELLPASALTQVGGQ--FFCTASRPTYALC 247
            |||..:.:.....| :|.::            |..:.|:.:|......|:  |.|..:..|..||
  Fly   223 LAPAVYAKETEDHPYIRAIS------------LYFNSLVGSSIREMFNGEFRFLCRMTEETERLC 275

  Fly   248 TLFTSVYVGFSDYPLDRSILPRILETTPAGISRGQLQHFGQLINSGKFQQYDYRSPRLNTLRYGR 312
            .......||.:....:|.:.|.||...|||::..|::||.|:|.||:|..|.|.|.: |...|..
  Fly   276 IEAVFGIVGRNWNEFNRKMFPVILGHYPAGVAAKQVKHFIQIIKSGRFAPYSYSSNK-NMQLYRD 339

  Fly   313 TTPPSYQLANVRLQLQIFHGSRDTLSSLADVQRLVRELRNSVTQMYQVP--GYNHIDFLFASSAP 375
            ..||.|.|:.|.:...:::.:.|.|....||:.:..:|.| ||..|.||  .:||:|||:|....
  Fly   340 HLPPRYNLSLVTVPTFVYYSTNDLLCHPKDVESMCDDLGN-VTGKYLVPQKEFNHMDFLWAIDVR 403

  Fly   376 QVVFQRIIQ 384
            :::::|::|
  Fly   404 KMLYRRMLQ 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11406NP_001014548.1 PLN02872 22..384 CDD:215470 134/379 (35%)
Lip1NP_523540.1 PLN02872 70..412 CDD:215470 131/362 (36%)

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