DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11406 and CG3635

DIOPT Version :10

Sequence 1:NP_001014548.1 Gene:CG11406 / 37877 FlyBaseID:FBgn0034990 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_610138.4 Gene:CG3635 / 35447 FlyBaseID:FBgn0032981 Length:425 Species:Drosophila melanogaster


Alignment Length:376 Identity:133/376 - (35%)
Similarity:212/376 - (56%) Gaps:22/376 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AVQRQQLQCQVHRIETADGYRLSLHRIPAPQNRWCPQQLR------PFLLMHGLLGSAGDFVSGG 85
            ::.......:.|.:.|.|.|.|:::|||:..||   ..|.      ...|.||:|.::.|::..|
  Fly    54 SISNHNYPVEEHTVITHDDYILTIYRIPSSPNR---SHLNRAGRRAVVFLQHGILSASDDWIING 115

  Fly    86 RGRSLALELHARCFDVWLANARGTTHSRGHRTLQTSDARFWRFSWHEIGIYDLPAIVDYVLARTN 150
            ...|||..|....:||||.||||.|:||.|:.:....:.||||||||||:|||.|::||.||::.
  Fly   116 PEASLAYMLADAGYDVWLGNARGNTYSRQHKHIHPDTSDFWRFSWHEIGVYDLAAMLDYALAKSQ 180

  Fly   151 RRQLHYVGHSQGTTVLLVLLSQRPEYNARFANAALLAPVAFLQHLSSPPLRL----LASDSSMAT 211
            ...||:|.||||||...||:|..|.||.:..:..||||:|:::..|....:|    |.:.|.::.
  Fly   181 SSSLHFVAHSQGTTAFFVLMSSLPLYNEKLRSVHLLAPIAYMRDHSFILSKLGGIFLGTPSFLSW 245

  Fly   212 LLLNKLGLHELLPASALTQVGGQFFCTASRPTYALCTLFTSVYVGFSDYPLDRSILPRILETTPA 276
            :    ||..||||.:.|.::..:..|::|.....||:.......|:....|::::||.:..|.||
  Fly   246 V----LGSMELLPITNLQKLICEHICSSSSMFNFLCSGLLDFIGGWGTRHLNQTLLPDVCATHPA 306

  Fly   277 GISRGQLQHFGQLINSGKFQQYDYRSPRLNTLRYGRTTPPSYQLANVRLQLQIFHGSRDTLSSLA 341
            |.|..|:.|:.||..||.|:|||: .|.||.:.|.:.|||||.:..::..:.:::...|.:|::.
  Fly   307 GASSSQVIHYLQLYRSGDFRQYDH-GPELNEIIYQQPTPPSYNVQYIKSCVDMYYSENDYMSAVG 370

  Fly   342 DVQRLVRELRNSVTQMYQVP--GYNHIDFLFASSAPQVVFQRIIQQAWQLD 390
            ||:.|...|  ...|:|::|  .:||.|||::::..:|:..:|||:..:.|
  Fly   371 DVKYLASLL--PCAQLYRIPFRDWNHYDFLWSNNVKEVINNKIIQKIRKYD 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11406NP_001014548.1 PLN02872 22..384 CDD:215470 130/368 (35%)
CG3635NP_610138.4 PLN02872 55..416 CDD:215470 132/370 (36%)

Return to query results.
Submit another query.