DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3356 and UFD4

DIOPT Version :9

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_012915.3 Gene:UFD4 / 853859 SGDID:S000001493 Length:1483 Species:Saccharomyces cerevisiae


Alignment Length:1216 Identity:257/1216 - (21%)
Similarity:442/1216 - (36%) Gaps:355/1216 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 LLRLCKLLDT-------CLLQLSLSHTAQAIPLRMLETFTTV-----SSVQQYMKD------EAV 183
            :::|..:.||       ||..|::...:..:..|.|...|.:     .|.|.|.|.      |.:
Yeast   393 IVQLVSIQDTPLENKLKCLDILTVLAMSSDVLSRELREKTDIVDMATRSFQHYSKSPNAGLHETL 457

  Fly   184 LFQYMERVFGFLIARNYFVRLRRLLDDKCPPLDGETLHAPSPLAEALLQLLLRPLEVAKRASAGG 248
            ::          :..:..:.:.|.:....||.|...|.|......            :.|.....
Yeast   458 IY----------VPNSLLISISRFIVVLFPPEDERILSADKYTGN------------SDRGVISN 500

  Fly   249 QMSSMSMAVCRNFTRDILATPHT-----DPLRYF------VLPCF------ALNVDFPFDLLMRS 296
            |....|:..|   ...||...:|     |..||.      |:.|.      |:|     |.|::.
Yeast   501 QEKFDSLVQC---LIPILVEIYTNAADFDVRRYVLIALLRVVSCINNSTAKAIN-----DQLIKL 557

  Fly   297 LYDALESAGPAESDSTSSRRSFLFYGVETGHKTTRMDSIFSSFLLNSLMVLDRRQLATLHQSPLL 361
            :...|     |:.::.|:...  .|..|.|           :.|:..|.:||   |.....|.|.
Yeast   558 IGSIL-----AQKETASNANG--TYSSEAG-----------TLLVGGLSLLD---LICKKFSELF 601

  Fly   362 VIYVR------LIAEMMP--NILQLPKSTLRGHANAPHRHRDGDDDS--EESEDEDEELPAARTL 416
            ...::      |:.::..  |.:.|.:.   |:.|......:||..|  ||.::.|||      .
Yeast   602 FPSIKREGIFDLVKDLSVDFNNIDLKED---GNENISLSDEEGDLHSSIEECDEGDEE------Y 657

  Fly   417 DY---DME------------QTCRTSGELSVKER----------ECLLESIAILNETERVDFIVQ 456
            ||   |||            ...||.....:|.:          :..:|..||..|..:::.:|.
Yeast   658 DYEFTDMEIPDSVKPKKISIHIFRTLSLAYIKNKGVNLVNRVLSQMNVEQEAITEELHQIEGVVS 722

  Fly   457 QL------DPHIENTHLIYALCEICHNLMIYNKH---AVFEYKLL---------YTLAFTPKFIR 503
            .|      |...|:...|:::.:.|    |:::.   :.||:...         .|.:....||.
Yeast   723 ILENPSTPDKTEEDWKGIWSVLKKC----IFHEDFDVSGFEFTSTGLASSITKRITSSTVSHFIL 783

  Fly   504 AVWFK-------------LAAESTQL--------------GFSA-----PLTLISKGVVPKHQ-G 535
            |..|.             |.:..|:|              |.|:     .:.|:..|...|.. |
Yeast   784 AKSFLEVFEDCIDRFLEILQSALTRLENFSIVDCGLHDGGGVSSLAKEIKIKLVYDGDASKDNIG 848

  Fly   536 VDRTIPLLATFCM------------------LFGRLLPTL------HDVEFVENKLLLQVHSTIN 576
            .|.:..:::..|:                  ....|:|.|      .|.|..||        .::
Yeast   849 TDLSSTIVSVHCIASFTSLNEFLRHRMVRMRFLNSLIPNLTSSSTEADREEEEN--------CLD 905

  Fly   577 HVRLMPFSI---AEIIQMSKTLKDISMGLVELAFPETRSNL-----------------ANYRKVL 621
            |:|...|..   .|.:.|..|:    .|::...|.....:|                 .|.|:..
Yeast   906 HMRKKNFDFFYDNEKVDMESTV----FGVIFNTFVRRNRDLKTLWDDTHTIKFCKSLEGNNRESE 966

  Fly   622 GHTEADD-KKLR--HQKQIWANL----LNVVVFVLNQIHTRDLRLGFCPEDHWTVTRLDLPLDRP 679
            ...||:: ||||  ::|:.:|.:    ...::.:|:.:|:..::     .|.:..::|...|.|.
Yeast   967 AAEEANEGKKLRDFYKKREFAQVDTGSSADILTLLDFLHSCGVK-----SDSFINSKLSAKLARQ 1026

  Fly   680 TDLPLTHSSRLRGIRPFQPIRDFTREDFENGPPMSTKQIRSITILREIPFVVPFNKRVSILQ--- 741
            .|.||..:|   |..|          |:            |:.:.|..||:.||:.|:..||   
Yeast  1027 LDEPLVVAS---GALP----------DW------------SLFLTRRFPFLFPFDTRMLFLQCTS 1066

  Fly   742 ----SLVAASKMRVQG-----NMQAFLQGPSVL---ITVRRSHLYEDAYDKL-RPDNEPDLRFKF 793
                .|:...|.:.:|     |.:|..|...:.   :.:.|..::......| :..:.||:   .
Yeast  1067 FGYGRLIQLWKNKSKGSKDLRNDEALQQLGRITRRKLRISRKTIFATGLKILSKYGSSPDV---L 1128

  Fly   794 RIQFVSSLGLDEAGIDGGGVFREFLSELIK------------TAFDPNRGFFMVTTDN----KLY 842
            .|::     .:||| .|.|...||.|.:.|            .::.......:.|||:    .|:
Yeast  1129 EIEY-----QEEAG-TGLGPTLEFYSVVSKYFARKSLNMWRCNSYSYRSEMDVDTTDDYITTLLF 1187

  Fly   843 PNPNVADLFEDYEK---HYYFIGRILGKSIYENLLVELPLAEFFLTKL--------AGKYSDVD- 895
            |.|  .:.|.:.||   .:.::|..:.:|:.:|.:::...::.|...|        ....|||: 
Yeast  1188 PEP--LNPFSNNEKVIELFGYLGTFVARSLLDNRILDFRFSKVFFELLHRMSTPNVTTVPSDVET 1250

  Fly   896 -IHQLASLDPELYRNLLYL---KDYSGDVSELNLDFTVASSSLGQTQIVELKPQGQSIPVTNSNR 956
             :..:..:||.|.::|.|:   ||.:..:..|:|.|||..:     ..:||.|.|.:..:.:||.
Yeast  1251 CLLMIELVDPLLAKSLKYIVANKDDNMTLESLSLTFTVPGN-----DDIELIPGGCNKSLNSSNV 1310

  Fly   957 IEYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIPIDLEDL--KKH 1019
            .||:..:.|..|...|.:...||.:|.|.|...|.:.:....||..:....|....:..|  ..:
Yeast  1311 EEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLN 1375

  Fly  1020 CEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLDPPFFI-------QN 1077
            .|:|  ::.:...|..|..::..|...:||..|:|:|...:.|:.|||.|:|.|.:       ..
Yeast  1376 AEHG--YTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKHAEDGL 1438

  Fly  1078 TGDMERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGAG-FELS 1122
            |.| |.||:..||.|.||||.:.:.:.||.:|..||:.||| |.||
Yeast  1439 TAD-EYLPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAFLLS 1483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 101/396 (26%)
HECTc 788..1119 CDD:214523 98/372 (26%)
UFD4NP_012915.3 HUL4 581..1482 CDD:227354 213/977 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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