DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3356 and hace1

DIOPT Version :9

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:XP_701235.5 Gene:hace1 / 572430 ZFINID:ZDB-GENE-110411-52 Length:905 Species:Danio rerio


Alignment Length:840 Identity:199/840 - (23%)
Similarity:339/840 - (40%) Gaps:186/840 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 RTLDYDME-QTCRTSGELSVKERECLLESIAILNETERVDFIVQQLDPHIENTHLIYALCEICHN 477
            |.|:|:.: ..|...|..::       ..:|:...||.:..:||    |:.|..:..|:.:...:
Zfish   121 RLLEYNADVNICNNEGLTAI-------HWLAVNGRTELLHDLVQ----HVTNVDVEDAMGQTALH 174

  Fly   478 LMIYNKHAVFEYKLLYTLA--FTPKFIRAVWFKLAAESTQLGFSAPLTLISKGVVPKHQGVDRTI 540
            :...|.|......||.:.|  ..|....|.....|....|...:..|.|.....:|...||   .
Zfish   175 VACQNGHKTTVQCLLDSGADINRPNVSGATPLYFACSHGQRDTAQILLLRGAKYLPDRNGV---T 236

  Fly   541 PL-------LATFCMLF----GRLLPTLHDVEFVEN-----KLLLQV------HSTINHVRLMPF 583
            ||       ....|.:.    |||..||  ::..:|     .:|.||      .:..|:.|::. 
Zfish   237 PLDLCVQGGYGETCEILIQHHGRLFQTL--IQMTQNDDIKENMLRQVLEHVSQQNDSNYQRILT- 298

  Fly   584 SIAEI----------------IQMSKTLKDISMGLVELAFPETRSNLANYRKVLGHTEADDKKLR 632
            |:||:                :|....|:.|.:.........:..|..|.....|:.....:..:
Zfish   299 SLAEVATTNGHKLLSLSSNFEVQTKSLLRIIRIFCHVFCLGPSSPNNGNDMGYNGNKTPRSQVFK 363

  Fly   633 HQKQIWANLLNVVVFVLNQIH------TR-----DLRLGFCPE---DHWTVTRLDLPLDRPTDLP 683
            ..:.:|.:|...:|.:..::.      ||     |:...|..:   ||      .:..:.| .|.
Zfish   364 PLELLWHSLDEWLVLISTELEKEITDTTRSSSGNDIASLFLKKQEVDH------SVSSENP-QLL 421

  Fly   684 LTHSSRLRGIRPFQPIRDFTREDFENGPPM-------------------STKQIRSITILREIPF 729
            |..||.::           |.|.:.:|..:                   |.:....:|..|.|.|
Zfish   422 LDASSVMK-----------TPEVYADGQDVISMIANRLSAVIQAFYMCCSCQMPHGMTSPRFIEF 475

  Fly   730 VVPFNKRVSILQSLVAASKMRVQGNMQAFLQGPSVL---ITVRRSHLYEDA----YDKL------ 781
            |.   |...:|:..|..:...:..:....|:.|.::   :.:.:...::|.    |:.|      
Zfish   476 VC---KHDEVLKCFVTRNPKIIFNHFHFLLECPELMSRFMHIIKGQPFKDRCEWFYEHLLAGQPD 537

  Fly   782 -----RPDNEPDL-------RFKFRIQFVSSLGLD------------EAGIDGGGVFREFLSELI 822
                 ||.||.|:       .|:...:.||....:            |.|: |.||.||:...|.
Zfish   538 SDMVHRPVNENDILLVHRDSLFRSSCEVVSKSSNEKLKQGIAVRFHGEEGM-GQGVVREWFDILS 601

  Fly   823 KTAFDPNRGFFMVTTDNKLY-PNPNVADLFEDYEKHYYFIGRILGKSIYENLLVELPLAEFFLTK 886
            ....:|:...|..:.|...: ||.| :.:..|:..::.|.|:|||.::|...||.:.....|...
Zfish   602 NEIINPDYALFTQSADGTTFQPNSN-SSVNPDHLNYFRFAGQILGLALYHRQLVNIYFTRSFYKH 665

  Fly   887 LAG---KYSDVDIHQLASLDPELYRNLLYLKDYSGDVSELNLD--FTVASSSLGQTQIVELKPQG 946
            :.|   .|.||     :|:|||..:||.::.|  .|:|:|.|:  |:|.:...|..:.|.|||.|
Zfish   666 ILGIPVSYQDV-----SSIDPEYAKNLQWILD--NDISDLGLELTFSVETDVFGTMEEVPLKPGG 723

  Fly   947 QSIPVTNSNRIEYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIP- 1010
            .:|.||..|:.||:||:.:.::...|:...|||.:|....:|...:.:|...||::|:||  :| 
Zfish   724 TTIQVTQDNKEEYVQLVTELRMTRAIQPQINAFLQGFHTFIPPSLIQLFDEYELELLLSG--MPE 786

  Fly  1011 IDLEDLKKHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLDPPFFI 1075
            ||:.|.|::.||...:..:.|.|..||||:|.....:|..||:|||..||.|..||.      |:
Zfish   787 IDVMDWKRNTEYTSGYDLQEPVIQWFWEVVENLTQEERVLLLQFVTGSSRVPHGGFA------FL 845

  Fly  1076 QNTGDMER------------LPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGA-GFELS 1122
            .....:::            |||:|||.|:||||.:.:.:.:|::||.|:..|: |:.::
Zfish   846 MGGSGLQKFTVAAVPYTSNLLPTSSTCINMLKLPEYPSKDVLRDRLLVALHCGSYGYTMA 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 121/407 (30%)
HECTc 788..1119 CDD:214523 113/369 (31%)
hace1XP_701235.5 ANK repeat 71..100 CDD:293786
ANK 71..98 CDD:197603
Ank_2 74..199 CDD:289560 18/88 (20%)
ANK 97..222 CDD:238125 22/111 (20%)
ANK repeat 102..133 CDD:293786 3/11 (27%)
ANK repeat 135..166 CDD:293786 8/41 (20%)
Ank_2 140..227 CDD:289560 19/97 (20%)
ANK repeat 168..199 CDD:293786 5/30 (17%)
ANK repeat 201..226 CDD:293786 5/24 (21%)
Ank_4 204..254 CDD:290365 10/52 (19%)
ANK repeat 233..261 CDD:293786 7/30 (23%)
HECTc 550..899 CDD:238033 111/365 (30%)
HECTc 575..898 CDD:214523 108/339 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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