DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3356 and smurf2

DIOPT Version :9

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_001107898.1 Gene:smurf2 / 563633 ZFINID:ZDB-GENE-030131-1830 Length:765 Species:Danio rerio


Alignment Length:436 Identity:136/436 - (31%)
Similarity:216/436 - (49%) Gaps:57/436 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   711 PPMSTKQIRSITILREIP-----FVVPFNKRVSILQSLVAASKMRVQGNMQAFLQGPSVLITVRR 770
            |....:|.:|:.....:|     ..||..||     .||...|:..|...|...|.....|.|.|
Zfish   357 PGQLKEQAQSVVSPGNLPEDPECLTVPKYKR-----DLVQKLKILRQELSQQQPQAGHCRIEVSR 416

  Fly   771 SHLYEDAYD---KLRP-DNEPDLRFKFRIQFVSSLGLDEAGIDGGGVFREFLSELIKTAFDPNRG 831
            ..::|::|.   |:|| |....|..|||         .|.|:|.|||.||:|..|.....:|..|
Zfish   417 EEIFEESYRQVMKMRPKDLWKRLMVKFR---------GEEGLDYGGVAREWLYLLSHEMLNPYYG 472

  Fly   832 FFMVTTDN--KLYPNPNVADLFEDYEKHYYFIGRILGKSIYENLLVE----LPLAEFFLTKLAGK 890
            .|..:.|:  .|..||:.| :..::..:::|:|||:|.:::....::    ||    |..:|.||
Zfish   473 LFQYSRDDIYTLQINPDSA-VNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLP----FYKQLLGK 532

  Fly   891 YSDVDIHQLASLDPELYRNLLYLKDYSGDVS-ELNLDFTVASSSLGQTQIVELKPQGQSIPVTNS 954
              .:.:..:.|:||:|:.:|:::.|  .|:: .|:..|.|..::.|:....||||.|:|||||..
Zfish   533 --PITLDDMESVDPDLHNSLVWILD--NDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTQD 593

  Fly   955 NRIEYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIPIDLEDLK-- 1017
            .:.||::|..:::....|.....|.:||.:.|:|...|..|..|||::::.|.. .||:.|.|  
Zfish   594 TKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKAFDEKELELIVCGLG-KIDINDWKSN 657

  Fly  1018 ---KHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLD----PPFFI 1075
               |||      :|:...:..||..:|.:|:.:|.:||:|||..||.||.|||.|.    |..|.
Zfish   658 TRLKHC------TPDSNIVKWFWRAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFT 716

  Fly  1076 --QNTGDMERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGAGF 1119
              |.......||.|.||.|.:.:||:::.:::.:|||.||:...||
Zfish   717 IHQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGF 762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 122/376 (32%)
HECTc 788..1119 CDD:214523 111/348 (32%)
smurf2NP_001107898.1 C2_Smurf-like 13..137 CDD:176028
WW 159..188 CDD:278809
WW 252..283 CDD:197736
WW 298..330 CDD:197736
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 341..375 3/17 (18%)
HECTc 410..762 CDD:238033 120/376 (32%)
HECTc 437..762 CDD:214523 111/349 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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