DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3356 and ctrip

DIOPT Version :9

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster


Alignment Length:1290 Identity:252/1290 - (19%)
Similarity:450/1290 - (34%) Gaps:384/1290 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 NGAVVLQSYARSFIHRQRRKRAEREVFDIYLMGHKDGIVEDESLTFLLRRLNFFYSIREAKDSER 111
            |.|.|..|.::|..|......|.||        .....|.::::.|:.|     |:.:|||.|:.
  Fly  2021 NAAAVAASISKSISHANLLAAANRE--------RARQWVREQAVDFVKR-----YTEQEAKRSKA 2072

  Fly   112 LIEV------------------------CQQILRQPARLL------QHSSPDSLWLLRLCKLLDT 146
            ..|.                        ...:|.:.:.:|      .|...|:|..|:.. ||::
  Fly  2073 ASESGATQSGSSGVGLSSTGNTPLSTAGSTNVLERLSSILFKLNGSYHDCLDALLELKTI-LLES 2136

  Fly   147 CLLQLSLSHTAQAIPLRMLETFTTVSSVQQYMKDEAVLFQYMERVFGFLIARNYF--VRLRRLLD 209
            .:....::|:.            .:.::..||..|..|.:...|:..|:   :.|  :.|..||.
  Fly  2137 DISPFEVNHSG------------LIKAMLNYMTSETGLVERDARLRSFM---HVFAGLPLEPLLQ 2186

  Fly   210 D--KCPPLDGETLHA-PSPLAEALLQLLLRPLEVAK-RASAGGQMSSMSMAV------------- 257
            :  :.|.::.....| .:.|...:.||...|::|.. .|..||:.:..::..             
  Fly  2187 NVGQMPTIEPIAFGAFVAKLNGCVTQLEQFPVKVHDFPAGPGGRSNQSALRFFNTHQLKCNLQRH 2251

  Fly   258 --CRNFTRDILATPHTDPL-------RYFVLPCFALNVDFPFDLLMRSLYDALESAGPAESDSTS 313
              |.|..:....|...|||       ||               |::|. |..:.    |:||..|
  Fly  2252 PQCNNLRQWKGGTVKIDPLAMVQAIERY---------------LVVRG-YGGIR----ADSDDDS 2296

  Fly   314 SRRSFLFYGVETGHKTTRMDSIFSSFLLNSLMVLDRRQLATL--HQSPLLVIYVRLIAEMMPNIL 376
            ..               .||...::.:|:......:.|. |:  |..|..:...:.:.:..|.:.
  Fly  2297 EE---------------DMDDNVAAVVLSQASFRHKLQF-TIGDHVLPYNMTVYQAVKQFSPLVS 2345

  Fly   377 QLPKS-----TLRGHAN---APH--RHRDGDDD----------SEESE-----DEDEELPAARTL 416
            :.|::     ||.|:|:   ..|  .:|..:::          |..|.     .:.:...::.:.
  Fly  2346 EQPETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQKQQSSSSSASS 2410

  Fly   417 DYDMEQTC------------------RTSGELSVKERECLLESIA---------ILNETERVDFI 454
            ..:...:|                  ::|.:...|:.|...|.||         .|:.:...|.:
  Fly  2411 CVNATSSCSSSSGVASGGGSLTKKAHKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLPADVV 2475

  Fly   455 VQQLDPHIENTHLIYALC--EICHNLMIYNKHAVFEYKLLYTLAFTPK--FIRAVWFKLAAESTQ 515
            ..| |..::      |||  .:.|.|   |:|....|..:......|:  ||..   |:.|::.:
  Fly  2476 TVQ-DASLD------ALCMLRVIHAL---NRHWDHLYGCVVRQNIIPQSDFIHP---KIMAKANR 2527

  Fly   516 LGFSAPLTLISKGVVPKHQGVDRTIPLLATFC----------MLF-----------GRLLPTLHD 559
             ....||.::: |.:|      :.:|.:...|          :||           .|||.|..|
  Fly  2528 -QLQDPLVIMT-GNLP------QWLPQIGMACPFLFPFETRHLLFYATSFDRDRALQRLLDTTPD 2584

  Fly   560 VEFVENKLLLQVHSTINHVRLMPFSIAEII-QMSKTLKDISMGLVELAFPETRSNLANYRKVLGH 623
            :...|:.  .:|...::. |....|..||: |....|:|                       .||
  Fly  2585 LNAAESS--ERVAPRLDR-RKRAISRTEILKQAEHILQD-----------------------FGH 2623

  Fly   624 TEADDKKLRHQKQIWANL---LNVVVFVLNQIHTRDLRLGFCPEDHWTVTRLDLPLDRPTDLPLT 685
            ::| ..:::::.::...|   |.....|..::...||.|       |                  
  Fly  2624 SKA-LLEIQYENEVGTGLGPTLEFYALVSAELQRTDLGL-------W------------------ 2662

  Fly   686 HSSRLRGIRPFQPIRDFTREDFENGPPMSTKQIRSITILREIPFVVPFNKRVSILQ--------- 741
                                   ||.. |.|| .|:||:.    ||..|..|..::         
  Fly  2663 -----------------------NGSD-SYKQ-NSVTIVD----VVKANSAVLHIEDALEATTTD 2698

  Fly   742 ---------SLVAASKMRVQGNMQAFLQGPSVLITVRRSHLYEDAYDKLRPD--------NEPDL 789
                     |||::|........|.....|:  .:..|||:......:...:        ||..|
  Fly  2699 QNTPAVAGASLVSSSTTTTTTTAQQHQHPPT--RSSSRSHVLRSGAGQQPVEHSSSSAGANENAL 2761

  Fly   790 RFKFRIQFVSSLGLDEAGIDGGGVFREFLSELIKTAFDPNRGFFMVTTDNK-------LYPNP-- 845
            ......||..:...:.|.||.........:.:.......|......||...       |:|.|  
  Fly  2762 NMVIAQQFSDTNSANPAAIDNPSSTTTATTVVQHNTTTNNSSIITTTTTTSYVHAVHGLFPLPLG 2826

  Fly   846 ---NVADLFEDYEKHYYFIGRILGKSIYENLLVELPLAEFFLTKLAGKYSDVDIHQLASLDPELY 907
               .:..:.:...| :.|:|:.:.|::.::.:::||.:..|...|..:...:.:..|..:.||:.
  Fly  2827 KSSKLPQMTKAKAK-FKFLGKFMAKAVMDSRMLDLPFSLPFYRWLVSEEHSIGLADLMRVAPEVQ 2890

  Fly   908 RNLLYLKDYSGD----VSELNLDFTVASSSLGQTQI-------------------VELKPQGQSI 949
            ..|:.|:|....    :|:.|:|....:..:.|..:                   :||...|:..
  Fly  2891 NTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADLGLDFVLPGHANIELCRGGRDT 2955

  Fly   950 PVTNSNRIEYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILI--SGAE---I 1009
            |||..|..:|:.|:..:.|...:::...|.|:|..:|.||:.|.||..:||:.:.  ||:|   .
  Fly  2956 PVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLRMFYPEELECVFCGSGSEQQHS 3020

  Fly  1010 PIDLEDLKKHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLDPPFF 1074
            ..:::.|::.|.....|..:..:|...:|:|..::..::|..|:|||...|.|..|||.|.||..
  Fly  3021 RWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQFVTGSPRLPTGGFKALTPPLT 3085

  Fly  1075 I------QNTGDMERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGA-GFELS 1122
            |      :|....:.||:..||.|.||||.:.:.|.||:||..|...|: .|.||
  Fly  3086 IVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVMRQKLKVAANEGSMSFHLS 3140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 96/408 (24%)
HECTc 788..1119 CDD:214523 91/377 (24%)
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442 17/65 (26%)
HECTc <2818..3138 CDD:294058 82/320 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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