DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3356 and Nedd4

DIOPT Version :10

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster


Alignment Length:849 Identity:204/849 - (24%)
Similarity:348/849 - (40%) Gaps:180/849 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   380 KSTLRGHANA-PHRHRDGDDDSEESEDEDEELPAARTLDYDMEQTCRTSGELSVKERECLLESIA 443
            ::|..|..:| ||....|..|:..:..|:.:....||  |.:..|.||    :..:|..:|.|.:
  Fly   226 EATNAGETSAQPHPFPTGGHDALPAGWEERQDANGRT--YYVNHTART----TQWDRPTVLNSHS 284

  Fly   444 ILNETERV--DFIVQQLDPHIENTHLIYALCEICHNLMIYNKHAVFEYKLLYTLAFTPKFIRAVW 506
            ..:..:::  || .::....:::|....:...|.||.:..|.:|.       .||:||       
  Fly   285 SQSTDDQLASDF-QRRFHISVDDTESGRSADSISHNSIEDNNNAA-------GLAYTP------- 334

  Fly   507 FKLAAESTQLGFSAPLTLISKGVVPKHQGVDRTIPLLATFCMLFGR---LLPTLHDVEFVENKLL 568
             |.||.|     |||     ......:.|:      ||...|.:..   ..||:....||.|.| 
  Fly   335 -KTAATS-----SAP-----PNTPTNNNGI------LAQIAMQYRAEEDQDPTVDHTSFVYNSL- 381

  Fly   569 LQVHSTINHVRLMPFSIAEIIQMSKTLKDISMGLVELAF--PETRSNLANYRKVLG--------- 622
               ...:.| |....|...:....:.::: :.|:.::|.  |.||....|.....|         
  Fly   382 ---RHPVAH-RQPEISATSLQNDLRPVRE-APGVPDIAITNPFTRRAAGNMAGGAGWQQERRRQQ 441

  Fly   623 ---HTEADDKKLRHQKQIWANLLNVVVFVLN----------QIHTRDLRLGFCPEDHWTVTRLDL 674
               |.:...::.:.|:|      |.::..::          |.|.:..|......||       .
  Fly   442 MQLHIQQHQQRQQQQQQ------NRILLDVDHRQQEPQHRGQRHQQQHRPSNEDTDH-------T 493

  Fly   675 PLDRPTDL--PLTHSSRLRGIRPFQPIRDFTREDFENGPPMSTKQI----RSITI---LREIPFV 730
            ....|:|:  |.|..:.........|:...|..:.|..||..:.|:    |:..|   .|...::
  Fly   494 DSHNPSDISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWI 558

  Fly   731 VPFNKRVSILQS-----------LVAASKMRVQGNMQAF---------------LQGPSVL---- 765
            .|.|.|.|.:.:           |....:.||..:.:.|               |..|::.    
  Fly   559 DPRNGRASPMPNQTRRVEDDLGPLPEGWEERVHTDGRVFYIDHNTRTTQWEDPRLSNPNIAGQAV 623

  Fly   766 ----------------------------ITVRRSHLYEDAYDKLRPDNEPD-LRFKFRIQFVSSL 801
                                        |.:||:.:.||:|..:....:.| |:.|..::|..  
  Fly   624 PYSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTSILEDSYRIISSVTKTDLLKTKLWVEFEG-- 686

  Fly   802 GLDEAGIDGGGVFREFLSELIKTAFDPNRGFFMVTT-DNKLYPNPNVADLF-EDYEKHYYFIGRI 864
               |.|:|.||:.||:...|.|..|:|..|.|..:. ||......|.:.|. |::..::.|||||
  Fly   687 ---ETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQINNGSGLCNEEHLSYFKFIGRI 748

  Fly   865 LGKSIYENLLVEL----PLAEFFLTKLAGKYSDVDIHQLASLDPELYRNLLYLKDYSGDVSELNL 925
            .|.::|...|::.    |..:..|.|      .:|:..:.|:|.|.|.:|:::|:  .|...|.|
  Fly   749 AGMAVYHGKLLDAFFIRPFYKMMLQK------PIDLKDMESVDTEYYNSLMWIKE--NDPRILEL 805

  Fly   926 DFTVASSSLGQTQIVELKPQGQSIPVTNSNRIEYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIE 990
            .|.:.....||....||||.|.:|.|||.|:.||::|:.:::...:::...::|..|..:::|:.
  Fly   806 TFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQMSSFLDGFGSIIPLN 870

  Fly   991 WLYMFSNKELQILISGAEIPIDLEDLKKHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFV 1055
            .:.:|...||::|:.|.: .||::|.:::..|.|::...|..|..||..:..|.:..|.:||:||
  Fly   871 LIKIFDEHELELLMCGIQ-NIDVKDWRENTLYKGDYHMNHIIIQWFWRAVLSFSNEMRSRLLQFV 934

  Fly  1056 TSCSRPPLLGFKDL----DPPFF-IQNTGDMERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQS 1115
            |..||.|:.|||:|    .|..| |:..|.....|.|.||.|.|.|||::...|:::||:.||:.
  Fly   935 TGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRAHTCFNRLDLPPYEGYLQLKDKLIKAIEG 999

  Fly  1116 GAGF 1119
            ..||
  Fly  1000 SQGF 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 116/366 (32%)
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999
WW 248..277 CDD:459800 7/34 (21%)
HUL4 <523..1003 CDD:227354 132/493 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.