DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3356 and smurf1

DIOPT Version :9

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_001001943.1 Gene:smurf1 / 321695 ZFINID:ZDB-GENE-040426-2744 Length:731 Species:Danio rerio


Alignment Length:568 Identity:163/568 - (28%)
Similarity:251/568 - (44%) Gaps:127/568 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   622 GHTEADDKKLRHQKQIWANLLNVVVFVLNQIH---TRDLRLGFCPEDHWTVTRLDLPLDRPTDLP 683
            |||        |..|             |:.|   :.||..|:  |...||......|...|.:.
Zfish   218 GHT--------HTPQ-------------NRPHGHQSPDLPEGY--EQRTTVQGQVYFLHTQTGVS 259

  Fly   684 LTHSSRLRGIRPFQPIRDFTREDFEN-GPPMSTKQIRSITILREIPFVVPFNKRVSILQSL---V 744
            ..|..|:.        ||......|. ||....::||| |:...|.||...|:........   :
Zfish   260 TWHDPRIP--------RDLNSVSCEELGPLPPGREIRS-TVSGRIYFVDHNNRTTQFTDPRLHHI 315

  Fly   745 AASKMRVQGNMQAF-----------------------------------LQGPSV---LITVRRS 771
            .:...:|:.:.||.                                   ||.|..   .|.|.|.
Zfish   316 MSQHSQVKESSQALPVQMEVGMEEGDGELPVRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSRE 380

  Fly   772 HLYEDAYD---KLRP-DNEPDLRFKFRIQFVSSLGLDEAGIDGGGVFREFLSELIKTAFDPNRGF 832
            .::|::|.   |:|| |.:..|..|||         .|.|:|.|||.||:|..|.....:|..|.
Zfish   381 EIFEESYRQIMKMRPKDLKKRLMVKFR---------GEEGLDYGGVAREWLYLLCHEMLNPYYGL 436

  Fly   833 FMVTTDN--KLYPNPNVADLFEDYEKHYYFIGRILGKSIYENLLVE----LPLAEFFLTKLAGKY 891
            |..:|||  .|..||: :.:..|:..:::|:|||:|.:::....:.    ||    |..:|.|| 
Zfish   437 FQYSTDNIYTLQINPD-SSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTLP----FYKQLLGK- 495

  Fly   892 SDVDIHQLASLDPELYRNLLYLKDYSGDV-SELNLDFTVASSSLGQTQIVELKPQGQSIPVTNSN 955
             .:.:..|.::||||:::|:::.:  .|: |.|:..|.|..::.|:....||||.|::||||..|
Zfish   496 -PIQLCDLETVDPELHKSLVWILE--NDITSVLDHTFCVEHNAFGKFLQHELKPNGKNIPVTEEN 557

  Fly   956 RIEYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIPIDLEDLK--- 1017
            :.||::|..:::....|.....|.:||.:.::|...|..|.||||:::|.|.. .|||.|.|   
Zfish   558 KKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNKELELIIGGLG-KIDLNDWKANT 621

  Fly  1018 --KHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLD-------PPF 1073
              |||......      :..||:.:|.||:.:|.:||:|||..:|.||.|||.|.       |..
Zfish   622 RLKHCVADSNI------VKWFWQAVESFDEERRGRLLQFVTGSTRVPLQGFKALQGSTGSAGPRL 680

  Fly  1074 FIQNTGD--MERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGAGF 1119
            |..:..|  .:.||.|.||.|.:.:||:::.|::.||||.|::...||
Zfish   681 FTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGF 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 127/379 (34%)
HECTc 788..1119 CDD:214523 116/351 (33%)
smurf1NP_001001943.1 C2_Smurf-like 14..138 CDD:176028
WW 234..266 CDD:197736 9/33 (27%)
WW 280..312 CDD:197736 9/32 (28%)
HECTc 373..728 CDD:238033 125/379 (33%)
HECTc 397..728 CDD:214523 117/355 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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