DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3356 and Hectd3

DIOPT Version :10

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_001386141.1 Gene:Hectd3 / 313525 RGDID:1309823 Length:861 Species:Rattus norvegicus


Alignment Length:591 Identity:145/591 - (24%)
Similarity:233/591 - (39%) Gaps:124/591 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 LAFPETRSNLANYRKVLGHTEADDKKLRHQKQIWANLL-NVVVFVLNQIH--TRDLRLGFCPEDH 666
            |....|..|....|.|:...|.|:.|......|...|: :|.|.....:|  ..::|:..|.:|.
  Rat   296 LTVDTTDDNFMPKRVVVYGGEGDNLKKLSDVNIDETLIGDVCVLEDMTVHLPVIEIRIVECRDDG 360

  Fly   667 WTV------------TRLDLPLDRPTDLPLTHSSRLRGIRP------------FQPIRDFTRE-- 705
            ..|            ..|.|..|......|....||.|..|            |..|.|....  
  Rat   361 IDVRLRGVKIKSSRQRELGLNADLFQPASLVRYPRLEGTDPEVLYRRAVLLQRFIKILDSVLHHL 425

  Fly   706 ----DFENGPPMSTKQIRSITIL-REIPFVVPFNKRVSILQSLVAASKMRVQGNMQAFLQGPSVL 765
                |...|.....||::...:| |:.|             |||.......:.:..:|:  |.:.
  Rat   426 VPAWDHTLGTFSEIKQVKQFLLLSRQRP-------------SLVTQCLRDSESSKPSFM--PRLY 475

  Fly   766 ITVR---------------RSHLYEDAYDKLRPDN---EP-DLRFKFRI-QFVSSLGLDEAGIDG 810
            |..|               ::.::...|:.|:|.:   :| |.|:..|. |:.....:.|..||.
  Rat   476 INRRLAMEHRACPSRDPACKNAVFTQVYEGLKPSDKYEKPLDYRWPMRYDQWWECKFIAEGIIDQ 540

  Fly   811 GGVFREFLSELIK-----TAFDPNRGFFMVTTDNK---------LY-PNPNVADLFEDYEKHYYF 860
            ||.||:.|:::.:     :|..|....|.|.|.|:         :| |||:..| |..||    :
  Rat   541 GGGFRDSLADMSEELCPSSADTPVPLPFFVRTANQGNGTGEARDMYVPNPSCRD-FAKYE----W 600

  Fly   861 IGRILGKSIYENLLVELPLAEFFLTKLAGKYSDVD-IHQLASLDPELYRNLLYLKDYSGDVSEL- 923
            ||:::|.::.....:.|.|..|...:|:|:  :|. .....::|..|.:.|..::....:..|. 
  Rat   601 IGQLMGAALRGKEFLVLALPGFVWKQLSGE--EVSWSKDFPAVDSVLVKLLEVMEGVDKETFEFK 663

  Fly   924 ---NLDFTVASSSLGQTQIVELKPQGQSIPVTNSNRIEYLQLIADYKLNVQIRRHCNAFRKGLSN 985
               .|.||..   |...|:|||.|.|..|.|...:|:.::||:...:|. :.:....|.:.||..
  Rat   664 FGKELTFTTV---LSDQQVVELIPGGTGIVVGYEDRLRFIQLVQKARLE-ESKEQVAAMQAGLLK 724

  Fly   986 VLPIEWLYMFSNKELQILISG-AEIPIDLEDLKKHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRR 1049
            |:|...|.:.:.:||:..:.| .|:.:|.  |:|...: .:|.|....:..|||.|..|.:..|.
  Rat   725 VVPQAVLDLLTWQELEKKVCGDPEVTVDA--LRKLTRF-EDFEPSDTRVQYFWEALNNFTNEDRS 786

  Fly  1050 QLLKFVTSCSR--------PPLLGFKDLDPPFFIQNTGDMERLPTASTCTNLLKLPPFKTVEQMR 1106
            :.|:|||..||        |..||::..|            .||.:|||::.|.||.:.:.:...
  Rat   787 RFLRFVTGRSRLPARIYIYPDKLGYETTD------------ALPESSTCSSTLFLPHYASAKVCE 839

  Fly  1107 EKLLYA 1112
            |||.||
  Rat   840 EKLRYA 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 105/396 (27%)
Hectd3NP_001386141.1 APC10-HECTD3 238..371 CDD:176487 17/74 (23%)
HECT 579..845 CDD:459880 79/291 (27%)

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