Protein Alignment CG3356 and herc-1

DIOPT Version :9

• Sequence 1: NP_611896.1
• Gene: CG3356 / 37876
• FlyBaseID: FBgn0034989
• Length: 1122
• Species: Drosophila melanogaster
• Sequence 2: NP_490834.1
• Gene: herc-1 / 171700
• WormBaseID: WBGene00021685
• Length: 1019
• Species: Caenorhabditis elegans
• Alignment Length: 498
• Identity: 134/498 - (26%)
• Similarity: 221/498 - (44%)
• Gaps: 74/498 - (14%)

  Fly   640 NLLNVVVFVLNQIHTR-DLRLGFCPEDHWTVTRLD---LPLDRPTDLPLTHSSRLRGIRPFQPIR 700
            :::.:..|.:::::|. ||:|.:..|    :||.|   ..||..|..|...:...:|
 Worm   581 HIIPLETFYIDELNTSVDLKLEYVLE----LTRQDPNKTELDYWTHFPFLLNGVAKG-------- 633

  Fly   701 DFTREDFENGPPMSTKQIRSITILREIPFVVPFNKRVSILQSLVAASKMRVQGNMQAFLQGPSVL 765
                                     |:.||..:     ::|:|...|.:....:.....:.|.:.
 Worm   634 -------------------------ELIFVEAW-----LMQTLRRQSSLFNTAHGTIIFELPHLE 668

  Fly   766 ITVRRSHLYEDAYDKLRPDNEPDLRFKFRIQFVSSLGLDEAGIDGGGVFREFLSELIKTAFDPNR 830
            :||||..:..|..:::...:|.||:...::....     |...|.|||.:||...:::.....:.
 Worm   669 LTVRREFIVSDTMNQMAGLSESDLQKPLKVNIAG-----EDADDAGGVRKEFFILVMRKILQSDY 728

  Fly   831 GFFMVTTDNKLYPNPNVADLFEDYEKHYYFIGRILGKSIYENLLV--ELPLAEFFLTKLAGKY-- 891
            |.|....::.|.....:...|.|.|: ::.:||::|.|||.:.:|  ..|||.:       ||
 Worm   729 GMFSEDEESHLVWFSGLPSEFCDREQ-FHQLGRLVGLSIYNHSIVPFPFPLALY-------KYLL 785

  Fly   892 -SDVDIHQLASLDPELYRNLLYLKDYSGDVSE--LNLDFTVASSSLGQTQIVELKPQGQSIPVTN 953
             :..|:..|..|.|...:.|..|..|..|..|  ..|:|.::.:.||:|...||...|...||||
 Worm   786 DTPPDLEDLCELSPSEGKGLKMLLSYEEDDVEDVFGLNFCISFNILGETHTTELLSGGTEKPVTN 850

  Fly   954 SNRIEYLQLIADYKL----NVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIPIDLE 1014
            :||.||::|...::|    |.:|.:....||||.|..|....|..|...||:.:|.|.| ..|..
 Worm   851 ANRDEYVRLYVHHRLELGYNGEIAQQALLFRKGFSESLHSRTLRFFQPCELKEMIVGNE-NYDWN 914

  Fly  1015 DLKKHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLDPPFFIQNTG 1079
            :.:....|.||:|..||:|..||:......|.:||:.|:|:|..:|.|:.|:::|...  ||.:.
 Worm   915 EFRDILMYRGEYSSSHPTIQAFWKAFFALTDDERRKFLQFLTGSTRIPVSGWEELHAA--IQPSA 977

  Fly  1080 DMERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGAGFELS 1122
            . |.||.|.||.|||.||......::..:|..:|:...||.|:
 Worm   978 P-ESLPVAHTCFNLLDLPNIADDVELLRRLRISIEHTEGFTLA 1019

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG3356	NP_611896.1	HECTc	766..1120	CDD:238033	111/364 (30%)
		HECTc	788..1119	CDD:214523	104/341 (30%)
herc-1	NP_490834.1	ATS1	2..359	CDD:227511
		HECTc	667..1016	CDD:238033	110/365 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5021
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810