DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3356 and Ube3b

DIOPT Version :9

Sequence 1:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster
Sequence 2:NP_473434.2 Gene:Ube3b / 117146 MGIID:1891295 Length:1070 Species:Mus musculus


Alignment Length:1219 Identity:349/1219 - (28%)
Similarity:517/1219 - (42%) Gaps:286/1219 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 IRKAALERQKRNELRQKENGAVVLQSYARSFIHRQRRKRAEREVFDIYLMGHKDGIVEDESLTF- 92
            |.:|...|::|...:::|..||.:|:..|||:.|:|..|..|:..|.:....:.|..:..:|.. 
Mouse    13 IDRARQAREERLVQKERERSAVTIQALVRSFLCRRRLHRDIRKEIDEFFSADESGSSKRSALCIF 77

  Fly    93 -LLRRLNFFYSIREAKDSERLIEVCQQILRQPARLLQHSSPDSLWLLRLCKLLDTCLLQLS---- 152
             :.|||.|.  .:..:|||||.::|:.||..    :...:...:|.:.|....|..||.:.    
Mouse    78 KIARRLLFI--CKTTEDSERLEKLCRSILNS----MDAENEPKVWYVSLALSKDLTLLWIKQIKS 136

  Fly   153 -LSHTAQ----------------AIPLRMLETFTTVSSVQQYM-KDEAV---LFQYMERVFGFLI 196
             |.|..:                .:.|.||.|||..|:.:... |.|::   |......:.|.|.
Mouse   137 ILWHCCELLGQLKPEILQDSRLITLYLTMLVTFTDTSTWKILRGKGESLRPALNHICANIMGHLN 201

  Fly   197 ARNYFVRLRRLLDDKCPPLDGETLHAPSP-----LAEALLQLLLRPLEVAKRASAGGQMSSMSMA 256
            .|..:..|:.||.        ..|..|.|     :..|...|.|||:..|       |.|...| 
Mouse   202 QRGLYSVLQVLLT--------RGLARPRPCLSKGMLTAAFSLALRPVVAA-------QFSDNLM- 250

  Fly   257 VCRNFTRDILATP----HT--------------DPLRYFVL--------------------PCFA 283
              |.|...:::.|    |.              |.||.|::                    .|..
Mouse   251 --RPFIIHVMSVPALVAHLSTVAPERLGVLESHDMLRKFIVFLRDRDRCRDACESLEGCHTLCLM 313

  Fly   284 LNVDFPFDLLMRSLYDALESAGPAESDSTSSRRSFLF-----YGVETGHKTTRMDSIFSSFL--- 340
            .|:.....|.:|.|.:        |.|...|..:.:.     |..:.....|....:...|.   
Mouse   314 GNLLHLGSLSLRLLEE--------EMDGFVSALTQMLCYCQKYVAQKKSNLTHWHPVLGWFSQPV 370

  Fly   341 ---LNSLMVLDRRQLATLHQSPLLVIYVRLIAEMMPNILQLPKSTLRGHANAPHRHRDGDDDSEE 402
               ||..|.|..:||..|...||:.|       :..:||   ...|..||.              
Mouse   371 DYGLNDSMYLITKQLQFLWAVPLIRI-------LFSDIL---SRKLLEHAE-------------- 411

  Fly   403 SEDEDEELPAARTLDYDMEQTCRTSGELSVKE--RECLLESIAILNETERVDFIVQQLDPHIENT 465
                    ||.........||.     |.||.  :....:|.::.|       |::.:.....::
Mouse   412 --------PAPVQPQPSSPQTV-----LPVKSLLKRAFQKSASVRN-------ILRPVGGRRVDS 456

  Fly   466 HLIYALCEICHNLMIYNKHAV----FEYKLLYTLAFTPKFIRAVWFKLAAESTQLGFSAPLTLIS 526
            ..:..:|.||   ::|.....    ...::|..|.:....:..:|    |...:||....|.|..
Mouse   457 AEVRKVCNIC---VLYQTSLTTLTQIRLQILTGLTYLDDLLPKLW----AFICELGPHGGLKLFL 514

  Fly   527 KGVVPKHQGVDRTIPLLATFCMLFGRLLPTLHDVEFVENKLLLQVHSTINHVRLMPFSIAEIIQM 591
            :.:........:.:.:|..||.....|:..|.|:|..|.::              .|.:.|::.:
Mouse   515 ECLNNDTGESKQLLAMLMLFCDCSRHLITILDDIEVYEEQI--------------SFKLEELVTI 565

  Fly   592 SKTL-----KDISMGLVELAFPETRSNLANYRKVLGHTEADDKKLRHQKQIWANLLNVVVFVLNQ 651
            |..|     |.|..|:||.|..||   |..::.|.|               |          |..
Mouse   566 SSFLNSFVFKMIWDGIVENAKGET---LELFQSVHG---------------W----------LMV 602

  Fly   652 IHTRDLRLGFCPEDHWTVTRLDLPLDRPTDLPLTHSSRLRGIRPFQPIRDFTREDFENGPPMSTK 716
            ::.||.|..|.|||||  .|.||   :|..|             ||.:....|            
Mouse   603 LYERDCRRRFAPEDHW--LRRDL---KPGVL-------------FQELDKDRR------------ 637

  Fly   717 QIRSITILREIPFVVPFNKRVSILQSLVAASKMRVQGNMQAFLQGPSVL-ITVRRSHLYEDAYDK 780
              |:..:|:.||.|||...||.:.:::|...|.:: |.::.....|.|. ||:|||.:.||.|::
Mouse   638 --RAQLVLQHIPHVVPHKNRVLLFRNMVIKEKEKL-GLVETSSASPHVTHITIRRSRMLEDGYEQ 699

  Fly   781 LRPDNEPDLRFKFRIQFVSSLGLDEAGIDGGGVFREFLSELIKTAFDPNRGFFMVTT-DNKLYPN 844
            ||..::..::...|::||:.||:||||||..|||:|||.|:||..|||....|..|: |.:|||:
Mouse   700 LRQLSQHAMKGVIRVKFVNDLGVDEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPS 764

  Fly   845 PNVADLFEDYEKHYYFIGRILGKSIYENLLVELPLAEFFLTKLAGK-----YSDVDIHQLASLDP 904
            | .:.:.|:|.:.:.|:|::|||::||.::|::|.|.|||:::.|.     ||.||  :|.|||.
Mouse   765 P-TSYIHENYLQLFEFVGKMLGKAVYEGIVVDVPFASFFLSQMLGHHHSVFYSSVD--ELPSLDS 826

  Fly   905 ELYRNLLYLKDYSGDVSELNLDFTVASSSLGQTQIVELKPQGQSIPVTNSNRIEYLQLIADYKLN 969
            |.|:||..:|.|.||:::|.|..:.....:||....||.|.|::||||:.|:|.|:.|:|.::::
Mouse   827 EFYKNLTSIKRYDGDIADLGLTLSYDEDVMGQLVCHELVPGGKTIPVTDENKISYIHLMAHFRMH 891

  Fly   970 VQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIPIDLEDLKKHCEYGGEFSPEHPSIV 1034
            .||:....|...|..:::..||:.|||..|||.||||....|||||||||..|.|.|...|..|:
Mouse   892 TQIKNQTAALISGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVII 956

  Fly  1035 TFWEVL-EGFDDMQRRQLLKFVTSCSRPPLLGFKDLDPPFFI--------QNTGDM--------- 1081
            ..|::| ..|...:|...|||||||||||||||..|.|||.|        |:|||.         
Mouse   957 WLWDILASDFTPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFF 1021

  Fly  1082 --------ERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGAGFELS 1122
                    .||||:|||.||||||.:.....:||||.|||....|||||
Mouse  1022 TIRKREPGGRLPTSSTCFNLLKLPNYSKKSVLREKLRYAISMNTGFELS 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 168/385 (44%)
HECTc 788..1119 CDD:214523 157/362 (43%)
Ube3bNP_473434.2 HECTc 684..1068 CDD:238033 168/386 (44%)
HECTc 709..1067 CDD:214523 157/360 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1163565at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100865
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1831
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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