DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cN-IIIB and nt5c3a

DIOPT Version :9

Sequence 1:NP_611895.1 Gene:cN-IIIB / 37875 FlyBaseID:FBgn0034988 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_955854.1 Gene:nt5c3a / 321720 ZFINID:ZDB-GENE-030131-439 Length:320 Species:Danio rerio


Alignment Length:307 Identity:117/307 - (38%)
Similarity:188/307 - (61%) Gaps:18/307 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KREPTGGRLR-LQDIPALTQDHCRMRDPAEVERIINEFVIGGPERMQIVSDFDYTITKQRTEDGG 69
            |::..|.:.: ::.:|...::...:|||..||:||...:.||..::||::|||.|:::... :|.
Zfish    22 KKQRAGKKTKIIEMMPEFEKNTVHIRDPERVEQIICGLIKGGASKLQIITDFDMTLSRFAV-NGK 85

  Fly    70 AVPSSFGIFNACQSLPENFKAETD----KLYH---KYRPIEIDPHMPIAEKVQYMIEWWTKSGEL 127
            ..||       |.::.:|.|..||    ||.|   .|.|||||||:.:.||..:|:||:.||..|
Zfish    86 RCPS-------CHNIIDNSKLVTDDCRKKLVHLKETYYPIEIDPHLTMEEKYPFMVEWYFKSHTL 143

  Fly   128 TSGFPFDQSEIDQIASKYTHALRDRTHEFFADLQRLGIPTLVFSAGLGNSVVSVLRQANVLHPNV 192
            ......::.::.:...:...:|::...:||..|.:..:|..:||||||:.:..::|||.|.||||
Zfish   144 LVEQRLEKDKLPEAVRESDVSLKEGYEQFFDRLHQHSVPVFIFSAGLGDVLEEIIRQAGVYHPNV 208

  Fly   193 KVVSNFLQFRD-GLLDGFQQPMIHTFNKNETVLNETSEYYDLVHTRDHIIVMGDSIGDADMASGV 256
            ||||||:.|.| |:|.||:..:||.:||::..|..| ||:..:....:||::|||:||..||.||
Zfish   209 KVVSNFMDFDDNGVLKGFKGELIHVYNKHDGALRNT-EYFKQLKDNGNIILLGDSLGDLTMADGV 272

  Fly   257 PASSHIMKIGFLFDHVEANMKKYMDTFDIVLVDDQTMDVPRTLLSLI 303
            |...:|:|||:|.|.||..::||||:::|||..|:|::||.::|..|
Zfish   273 PNVENILKIGYLNDKVEELLEKYMDSYNIVLARDETLEVPNSILQKI 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cN-IIIBNP_611895.1 HAD-SF-IE 22..303 CDD:273683 113/288 (39%)
nt5c3aNP_955854.1 UMPH-1 75..320 CDD:283479 100/254 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170584104
Domainoid 1 1.000 183 1.000 Domainoid score I3387
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 211 1.000 Inparanoid score I3639
OMA 1 1.010 - - QHG57847
OrthoDB 1 1.010 - - D1171042at2759
OrthoFinder 1 1.000 - - FOG0003221
OrthoInspector 1 1.000 - - oto38705
orthoMCL 1 0.900 - - OOG6_103467
Panther 1 1.100 - - O PTHR13045
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2179
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1211.910

Return to query results.
Submit another query.