DRSC/TRiP Functional Genomics Resources

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Protein Alignment cN-IIIB and nt5c3a

DIOPT Version :10

Sequence 1:NP_611895.1 Gene:cN-IIIB / 37875 FlyBaseID:FBgn0034988 Length:319 Species:Drosophila melanogaster
Sequence 2:NP_955854.2 Gene:nt5c3a / 321720 ZFINID:ZDB-GENE-030131-439 Length:331 Species:Danio rerio


Alignment Length:307 Identity:118/307 - (38%)
Similarity:188/307 - (61%) Gaps:18/307 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KREPTGGRLR-LQDIPALTQDHCRMRDPAEVERIINEFVIGGPERMQIVSDFDYTITKQRTEDGG 69
            |::..|.:.: ::.:|...::...:|||..||:||...:.||..::||::|||.|:::... :|.
Zfish    33 KKQRAGKKTKIIEMMPEFEKNTVHIRDPERVEQIICGLIKGGASKLQIITDFDMTLSRFAV-NGK 96

  Fly    70 AVPSSFGIFNACQSLPENFKAETD----KLYH---KYRPIEIDPHMPIAEKVQYMIEWWTKSGEL 127
            ..||       |.::.:|.|..||    ||.|   .|.|||||||:.:.||..:|:||:.||..|
Zfish    97 RCPS-------CHNIIDNSKLVTDDCRKKLVHLKETYYPIEIDPHLTMEEKYPFMVEWYFKSHTL 154

  Fly   128 TSGFPFDQSEIDQIASKYTHALRDRTHEFFADLQRLGIPTLVFSAGLGNSVVSVLRQANVLHPNV 192
            ......::.::.:...:...:|::...:||..|.:..:|..:||||||:.:..::|||.|.||||
Zfish   155 LVEQRLEKDKLPEAVRESDVSLKEGYEQFFDRLHQHSVPVFIFSAGLGDVLEEIIRQAGVYHPNV 219

  Fly   193 KVVSNFLQFRD-GLLDGFQQPMIHTFNKNETVLNETSEYYDLVHTRDHIIVMGDSIGDADMASGV 256
            ||||||:.|.| |:|.||:..:||.:||::..|..| ||:..:....:||::|||:||..||.||
Zfish   220 KVVSNFMDFDDNGVLKGFKGELIHVYNKHDGALRNT-EYFKQLKDNGNIILLGDSLGDLTMADGV 283

  Fly   257 PASSHIMKIGFLFDHVEANMKKYMDTFDIVLVDDQTMDVPRTLLSLI 303
            |...:|:|||:|.|.||..::||||::||||..|:|::||.::|..|
Zfish   284 PNVENILKIGYLNDKVEELLEKYMDSYDIVLARDETLEVPNSILQKI 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cN-IIIBNP_611895.1 HAD-SF-IE 22..303 CDD:273683 114/288 (40%)
nt5c3aNP_955854.2 HAD_5NT 59..331 CDD:319807 114/281 (41%)

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