DRSC/TRiP Functional Genomics Resources

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Protein Alignment cN-IIIB and cN-IIIB

DIOPT Version :10

Sequence 1:NP_611895.1 Gene:cN-IIIB / 37875 FlyBaseID:FBgn0034988 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_311397.5 Gene:cN-IIIB / 1272484 VectorBaseID:AGAMI1_001156 Length:302 Species:Anopheles gambiae


Alignment Length:295 Identity:183/295 - (62%)
Similarity:235/295 - (79%) Gaps:2/295 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RLRLQDIPALTQDHCRMRDPAEVERIINEFVIGGPERMQIVSDFDYTITKQRTEDGGAVPSSFGI 77
            :.:|.::.||.::|.::||||.||.::||.|.||.|::|:|:||||||||||..:|..|.:|||:
Mosquito     6 KFQLSEVAALQREHVKIRDPARVELMLNELVAGGREKLQVVTDFDYTITKQRLANGEKVLTSFGM 70

  Fly    78 FNACQSLPENFKAETDKLYHKYRPIEIDPHMPIAEKVQYMIEWWTKSGELTSGFPFDQSEIDQIA 142
            ||.|:|:|::...|...||||||||||||||...|||.||||||.|:|:|..||...|.:||::|
Mosquito    71 FNECKSIPQDVILEQRNLYHKYRPIEIDPHMAHEEKVVYMIEWWAKTGDLLRGFKLPQEDIDEVA 135

  Fly   143 SKYTHALRDRTHEFFADLQRLGIPTLVFSAGLGNSVVSVLRQANVLHPNVKVVSNFLQF-RDGLL 206
            .:|...|||.||:.|.:|..|.:|.|||||||||.|.|||:.|||::||||:||||||| .:|:|
Mosquito   136 KRYKDGLRDGTHDMFKELHELNVPCLVFSAGLGNCVSSVLKHANVMYPNVKLVSNFLQFSENGML 200

  Fly   207 DGFQQPMIHTFNKNETVLNETSEYYDLVHTRDHIIVMGDSIGDADMASGVPASSHIMKIGFLFDH 271
            :|.|.|||||||||||||:.| ||||:||:|||:||||||:|||.||||||:||||:||||||||
Mosquito   201 NGLQNPMIHTFNKNETVLDGT-EYYDIVHSRDHVIVMGDSLGDAGMASGVPSSSHILKIGFLFDH 264

  Fly   272 VEANMKKYMDTFDIVLVDDQTMDVPRTLLSLIEKQ 306
            .|.|:.:|||.||||||||||||:||.::.:::||
Mosquito   265 PELNLPRYMDAFDIVLVDDQTMDIPRAIVDMVKKQ 299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cN-IIIBNP_611895.1 HAD-SF-IE 22..303 CDD:273683 179/281 (64%)
cN-IIIBXP_311397.5 None

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