DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and TBX19

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_005140.1 Gene:TBX19 / 9095 HGNCID:11596 Length:448 Species:Homo sapiens


Alignment Length:445 Identity:91/445 - (20%)
Similarity:136/445 - (30%) Gaps:171/445 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1749 VIDSD-----EEDDDGERQLVIDEQDDE--QAETDVKQE--VERTG---FTIQTLPSSG----AL 1797
            |::|:     |:.|..|:||.|..:|..  |...:|..|  |.:.|   |.:..:..:|    |:
Human    22 VVESELQAGREKGDPTEKQLQIILEDAPLWQRFKEVTNEMIVTKNGRRMFPVLKISVTGLDPNAM 86

  Fly  1798 QITISDSAETSSHPAKDVN--------------TCHF----SGGFMPFIANVPAKFGETAPTTQF 1844
            ...:.|...|.||..|.||              :|.:    |..|.......|..|.:...|.:.
Human    87 YSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSSHSCVYIHPDSPNFGAHWMKAPISFSKVKLTNKL 151

  Fly  1845 -------------LTPQVQV---------TTSQSGPET----LTSSSSSHLPASKSAY------- 1876
                         ..|||.:         .|:.|.|||    :|:..:..:.|.|..|       
Human   152 NGGGQIMLNSLHKYEPQVHIVRVGSAHRMVTNCSFPETQFIAVTAYQNEEITALKIKYNPFAKAF 216

  Fly  1877 ---------PKINESLQE------------LFSSGVPPGGITITKVDSQ---------------- 1904
                     ..:.|::.|            :||:  |.|..|....:.|                
Human   217 LDAKERNHLRDVPEAISESQHVTYSHLGGWIFSN--PDGVCTAGNSNYQYAAPLPLPAPHTHHGC 279

  Fly  1905 --------EKTLPNETVQVVKNKKS----IAITGIHKQVTKAASS-TATVTAARAPVVKPQSTSV 1956
                    .:..|..:..:.:|...    |..:..:.||.....| |:..:...|.::     ||
Human   280 EHYSGLRGHRQAPYPSAYMHRNHSPSVNLIESSSNNLQVFSGPDSWTSLSSTPHASIL-----SV 339

  Fly  1957 SKVAPPIRPGATTQPKTLVRLYPKPAL-----AAGRKSLP---ANAKTP----VATPRQSQPVAC 2009
            .....||.||.:          |.|.|     .||..|.|   .:|.||    :..|      |.
Human   340 PHTNGPINPGPS----------PYPCLWTISNGAGGPSGPGPEVHASTPGAFLLGNP------AV 388

  Fly  2010 DKPPLVSGSTLP------ALVEPSARK-------SLPSKPLA------AGEHLRP 2045
            ..||.|..:..|      .|.|||...       ::.|.|.|      ||.|..|
Human   389 TSPPSVLSTQAPTSAGVEVLGEPSLTSIAVSTWTAVASHPFAGWGGPGAGGHHSP 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 36/145 (25%)
TBX19NP_005140.1 T-box_TBX19-like 36..218 CDD:410327 38/181 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.