DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx19

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_114394.1 Gene:Tbx19 / 83993 MGIID:1891158 Length:446 Species:Mus musculus


Alignment Length:262 Identity:64/262 - (24%)
Similarity:89/262 - (33%) Gaps:79/262 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1308 NEEILCI-IKWTNFLAAF----ESGFV-----FIWDVQMKTHNFLAATTTNLMPSVCGAIAVVNT 1362
            ||||..: ||:..|..||    |...:     .|.:.|..|::.|.....:....||.| |..|.
Mouse   197 NEEITALKIKYNPFAKAFLDAKERNHLKDVPEAISESQHVTYSHLGGWILSNPDGVCTA-ANSNY 260

  Fly  1363 KFA-----PDP----------------QALPLMARMLMN-----SMRNEKTNRLAVVMQGRQSFW 1401
            ::|     |.|                ||....|.|..|     ::....:|.|. |..|..| |
Mouse   261 QYATPLPLPAPHTHHGCEHYAGLRGHRQAPYPSAYMHRNHSPSVNLIESSSNNLQ-VFSGPDS-W 323

  Fly  1402 LVKGFLRHM------QGNACTKPTPMTHPLLTKKINVLCSLLVKQRVRENEKKTLGDGSGAPYEV 1460
            .......|.      ..|....|.|..:|.|.                     |:.:|.|.|  |
Mouse   324 TSLSSTPHASILSVPHSNGPINPGPSPYPCLW---------------------TISNGGGGP--V 365

  Fly  1461 LAG-DVSPQTS--LLMKNRSRDLKRKSQADERLLPSGPSMTKSSKPSAGGYPIAASVATSTTSAF 1522
            .:| :|...||  :|:.|.:      ..:...|||:  ..|.|:.....|.|...|:|.||.:|.
Mouse   366 ASGSEVHASTSGTILLGNPA------VTSPSSLLPT--QATTSAGVEVLGEPSLTSIAVSTWTAV 422

  Fly  1523 AS 1524
            ||
Mouse   423 AS 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241
Tbx19NP_114394.1 T-box_TBX19-like 34..216 CDD:410327 9/18 (50%)
Blue background indicates that the domain is not in the aligned region.

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