DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and eomesb

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001077044.1 Gene:eomesb / 799447 ZFINID:ZDB-GENE-070318-1 Length:534 Species:Danio rerio


Alignment Length:388 Identity:76/388 - (19%)
Similarity:128/388 - (32%) Gaps:129/388 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1451 GDGSGA---PYEVLAGDV------------SPQTSLLMKNRSRDLKRKSQADERLLP------SG 1494
            |.||||   |...|...|            ..||.:::..:.|          |:.|      :|
Zfish   124 GSGSGAVALPSAALRAQVYLCNRPLWLKFHRHQTEMIITKQGR----------RMFPFLSFNMTG 178

  Fly  1495 PSMTKSSKPSAGGYPIAASVATSTTSAFASSSGKSTPVCTAKTNSASTK----NKSSATG---IR 1552
            .|:       :..|.:...:..:..:.:....||......|..|....|    .:|..||   :|
Zfish   179 LSL-------SAHYNVFVEIVLADPNHWRFQGGKWVTCGKADNNMQGNKIYMHPESPNTGAHWMR 236

  Fly  1553 SNIEFRKV--------NHNDVDELQIPELHQTDHRWVVLDIFDDFS------HIFVPSFSDMISL 1603
            ..|.|.|:        |.|....:.:..||:...|..::::.||.|      .||....:..|::
Zfish   237 QEISFGKLKLTNNKGANINTSQMIVLQSLHKYQPRLHIVEVSDDRSERDSNTQIFSFPENQFIAV 301

  Fly  1604 TRIHSV----------------------MQVAEERQKVV--------KLQFFPNAPYDAFVTP-- 1636
            |...:.                      |....:|:::.        ..|..|||.|  .|.|  
Zfish   302 TAYQNTDITQLKIDHNPFAKGFRDNYDSMYTLPDRERLTPSPADSPRAQQMVPNARY--AVQPFL 364

  Fly  1637 -----SSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREH----------SIPVQRHRRS 1686
                 |..::....|.|::.|....::.|: ..|:.| ..|:.|:          |:|:|.:...
Zfish   365 QEQFSSLTQRSVTQPSSVEDPAQRWLISQN-SSKLEL-TAYEGEYSSSLLPYSFKSLPLQSYYPD 427

  Fly  1687 MAF-WVLQINGQVHFEIDTESTAKLAAQQKNAIGTPPGL--NVLKIPSQLSVEIEKNQDEVPP 1746
            .|| |..:::....|      ..||          |.||  :....|:..|.:.||.::|..|
Zfish   428 TAFSWGTRVSAGSSF------PRKL----------PSGLPWSPRPSPTDFSEDPEKAREENSP 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241
eomesbNP_001077044.1 T-box_TBR2 138..325 CDD:410331 33/203 (16%)
T-box_assoc 351..532 CDD:465042 34/144 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.