DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx21

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001164070.1 Gene:tbx21 / 797797 ZFINID:ZDB-GENE-080104-3 Length:609 Species:Danio rerio


Alignment Length:418 Identity:72/418 - (17%)
Similarity:123/418 - (29%) Gaps:149/418 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1527 GKSTPVCTAKTNSASTKNKSSATGIRSNIEFRKV---NHNDVDELQIPELHQTDHRWVVLDIFDD 1588
            |...|..|:||.          |.:....:|..|   .:.|:.:|:|      ||........|:
Zfish   293 GTEDPFLTSKTQ----------TFVFPETQFIAVTAYQNADITQLKI------DHNPFAKGFRDN 341

  Fly  1589 FSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQFFPNAPY--DAFVTPSSKKKIYF-GPLSLD 1650
            :..::.|...|.::.:        ..|.|:::....:|:.||  |.:::|..:.:.|. .|:|:.
Zfish   342 YDTLYAPPDPDRLTPS--------PTESQQLLSGSCYPHQPYLSDQYMSPLPQSRFYSREPVSMT 398

  Fly  1651 MPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSMAFWVLQINGQVHFEIDTESTAKLAAQQK 1715
            .|.|                  :...|.|   |.|    |.|                       
Zfish   399 QPCP------------------KDPTSSP---HSR----WYL----------------------- 415

  Fly  1716 NAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVVVIDSDEEDDDGERQLVIDEQDDEQAETDVKQE 1780
                                   .:|..|||                   :..|....||:....
Zfish   416 -----------------------SSQQAVPP-------------------NRLDFSAYETEYTSN 438

  Fly  1781 VERTGFTIQTLP------------SSGALQITISDSAETSSHPAKD-VNTCHFS--GGFMPFIAN 1830
            .....|.:|:.|            :|||:......:...|..|:.. :|..|.|  ...:.:...
Zfish   439 SLYKPFPLQSSPHHPLSYYSENPFTSGAVSSANPGAWTASGRPSPQYLNHPHHSKPTSSLSWFRA 503

  Fly  1831 VPAKFGETAPTT---------QFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAYPKINESLQEL 1886
            ||:....::||.         ..|.||.|........|: |..:....|:.||    ::.:...|
Zfish   504 VPSPAASSSPTATNSRFHASPSLLEPQRQPLLQDKSKES-TEDTWIEAPSVKS----VDSADSGL 563

  Fly  1887 FSSGVPPGGITITKVDSQEKTLPNETVQ 1914
            |..|............|.|.:.||.:.:
Zfish   564 FEGGESKKRRVSPYTSSTENSPPNRSAE 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx21NP_001164070.1 TBOX 150..343 CDD:238106 14/65 (22%)
T-box_assoc 363..608 CDD:292794 54/324 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574527
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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