DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and TBX1

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_016884414.1 Gene:TBX1 / 6899 HGNCID:11592 Length:545 Species:Homo sapiens


Alignment Length:772 Identity:151/772 - (19%)
Similarity:232/772 - (30%) Gaps:302/772 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1368 PQALPLMARMLMNSMRNEKTNRLAVVMQGRQSFWLVKGFLRHMQGNACTKPTPMTHPLLTKKINV 1432
            |:|.......|:.:...|:|     ..||..|...||  ||.:.|:    |..|....:|:.:..
Human     9 PRASAFSIASLVAAEAAERT-----AHQGSGSSDRVK--LRWLPGS----PAGMHFSTVTRDMEA 62

  Fly  1433 LCSLLVKQRVRENEKKTLGDGSGAPYEVLAGDVSPQTSLLMKNRSRDLKRKSQADERLLPSGP-- 1495
            ..:         :...:||...|.|     |..||                 .||    |.||  
Human    63 FTA---------SSLSSLGAAGGFP-----GAASP-----------------GAD----PYGPRE 92

  Fly  1496 --------SMTKSSKPSAGG-------YPIAASVATSTTSAFASSSGKSTPVCTAKTNSASTKNK 1545
                    ....::.|.|.|       ||.|.: |.:.|||.|...|.... |.|.. .|..|..
Human    93 PPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAPA-AGAATSAAAEPEGPGAS-CAAAA-KAPVKKN 154

  Fly  1546 SSATGIRSNIEFRKVNHNDVDELQIPELHQTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVM 1610
            :...|:...:|.:.                         ::|:|:.:    .::||         
Human   155 AKVAGVSVQLEMKA-------------------------LWDEFNQL----GTEMI--------- 181

  Fly  1611 QVAEERQKVVKLQFFPNAPYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVDRK---MMLREVY 1672
                                   ||.:.::          |.|...|.|..:|..   |:|.:. 
Human   182 -----------------------VTKAGRR----------MFPTFQVKLFGMDPMADYMLLMDF- 212

  Fly  1673 QREHSIPVQRHRRSMAF----WVL------QINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNVL 1727
                 :||...|...||    |::      ...|:||:..|  |.||.|...|..:    ..:.|
Human   213 -----VPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPD--SPAKGAQWMKQIV----SFDKL 266

  Fly  1728 KIPSQLSVEIEKNQDEVPPVVVIDSDEEDDDGERQLVIDEQDDEQ--AETDVKQEV-ERTGFTIQ 1789
            |:.:.|   ::.|..     ::::|..........:.:|.:.|.:  ||.:.|..| |.|.||..
Human   267 KLTNNL---LDDNGH-----IILNSMHRYQPRFHVVYVDPRKDSEKYAEENFKTFVFEETRFTAV 323

  Fly  1790 TLPSSGALQITISDSAETSSHPAKDVNTCHFSGGFMPFIANVPAKFGETAPTTQFLTPQVQVTTS 1854
            |     |.|.......:.:|:|        |:.||                             .
Human   324 T-----AYQNHRITQLKIASNP--------FAKGF-----------------------------R 346

  Fly  1855 QSGPETLTSSSSSHLPAS---KSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVV 1916
            ...||   ....:|.|.:   .||:.:....:    :|...|.|   |:.|:.|           
Human   347 DCDPE---DWPRNHRPGALPLMSAFARSRNPV----ASPTQPSG---TEKDAAE----------- 390

  Fly  1917 KNKKSIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKP 1981
                      ..::..:.|...|.:   ..|...||  .:::|..|..|||....    .|.|.|
Human   391 ----------ARREFQRDAGGPAVL---GDPAHPPQ--LLARVLSPSLPGAGGAG----GLVPLP 436

  Fly  1982 ALAAGRKSLPANAKTPVATPRQSQPVACDKPPLVSGSTLPALVEPSARKSLPSK-PLAAGEHLRP 2045
            ....||.| |.|.:..:..|..|:|:                      ...|.| |.||.:|...
Human   437 GAPGGRPS-PPNPELRLEAPGASEPL----------------------HHHPYKYPAAAYDHYLG 478

  Fly  2046 RQSLPAKVT------------ANP--------PAAARPDAASTSAQNLTNVSKAQLA 2082
            .:|.||...            |:|        ||||...||:.:|......|.|..|
Human   479 AKSRPAPYPLPGLRGHGYHPHAHPHHHHHPVSPAAAAAAAAAAAAAAANMYSSAGAA 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
TBX1XP_016884414.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141548
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.830

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