DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and TBX20

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001071121.1 Gene:TBX20 / 57057 HGNCID:11598 Length:447 Species:Homo sapiens


Alignment Length:593 Identity:111/593 - (18%)
Similarity:180/593 - (30%) Gaps:205/593 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1498 TKSSKPSAGGYPIAASVATSTTSAFASSSGKSTPVCTAKT---------NSASTKNKSSATGIRS 1553
            |.|.||.......|.|:|     |..||.|......|..|         .|:..:.....|.:.:
Human     4 TASPKPQLSSRANAFSIA-----ALMSSGGSKEKEATENTIKPLEQFVEKSSCAQPLGELTSLDA 63

  Fly  1554 NIEFRKVNHNDVDELQIPELHQTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQK 1618
            :.||...:.:.                              ||.|.:.:...|.:...:..|...
Human    64 HGEFGGGSGSS------------------------------PSSSSLCTEPLIPTTPIIPSEEMA 98

  Fly  1619 VVKLQFFPNAPYDAF--------VTPSSKKKIYFGPLSLDMPPPVLVLLQSVD---RKMMLREVY 1672
            .:.........:|.|        :|.|.::          |.|.:.|....||   :.::|.:: 
Human    99 KIACSLETKELWDKFHELGTEMIITKSGRR----------MFPTIRVSFSGVDPEAKYIVLMDI- 152

  Fly  1673 QREHSIPVQRHRRSMAF----WVLQINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNVLKIPSQL 1733
                 :||...|...|:    |:      |..:.|....|:|.....:..   .|..:||   |:
Human   153 -----VPVDNKRYRYAYHRSSWL------VAGKADPPLPARLYVHPDSPF---TGEQLLK---QM 200

  Fly  1734 SVEIEKNQDEVPPVVVIDSDEEDDDGE-----------RQLVIDEQDDEQAETDVKQEVERTGFT 1787
             |..||        |.:.::|.|..|.           |..:|.::|...:..::|.|..||...
Human   201 -VSFEK--------VKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIF 256

  Fly  1788 IQTL-PSSGALQITISDSAETSSHPAKDVNTCHFSGGFMPFIANVPAKFGETAPTTQFLTPQVQV 1851
            .:|: .:..|.|..:....:..|:|        |:.||.           :::..|......|  
Human   257 PETVFTAVTAYQNQLITKLKIDSNP--------FAKGFR-----------DSSRLTDIERESV-- 300

  Fly  1852 TTSQSGPETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVV 1916
                                         |||.:..|....|    |.....:|..|.:|: |..
Human   301 -----------------------------ESLIQKHSYARSP----IRTYGGEEDVLGDES-QTT 331

  Fly  1917 KNKKSIAITGIHKQVTKAASSTATVTAARAPVVKPQS-----TSVSKVAPPIRPGATTQPKTLVR 1976
            .|:.|...|..:..::...||:::....:    .|||     ||.:.:|.||             
Human   332 PNRGSAFTTSDNLSLSSWVSSSSSFPGFQ----HPQSLTALGTSTASIATPI------------- 379

  Fly  1977 LYPKPALAAGRKSLPANAK-----TPVATPRQSQPVACDKPPLVSGSTLPALVEPSARKSLPSKP 2036
              |.|.    :.|||..::     ||.|.....|.         ||.|.|:...|.........|
Human   380 --PHPI----QGSLPPYSRLGMPLTPSAIASSMQG---------SGPTFPSFHMPRYHHYFQQGP 429

  Fly  2037 LAAGEHLR 2044
            .||.:.||
Human   430 YAAIQGLR 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
TBX20NP_001071121.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 62..81 5/48 (10%)
T-box 102..288 CDD:307177 45/241 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..340 6/24 (25%)
DUF853 <357..>409 CDD:331106 17/83 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141549
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.930

Return to query results.
Submit another query.