DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and byn

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_524031.2 Gene:byn / 39349 FlyBaseID:FBgn0011723 Length:697 Species:Drosophila melanogaster


Alignment Length:705 Identity:132/705 - (18%)
Similarity:223/705 - (31%) Gaps:194/705 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1453 GSGAPYEVLAGDVSPQTSLLMKNRSRDLKRKSQADERLL-PSGPSMTKSSKPSAGG------YPI 1510
            |:|:|.|:   |.:.:.||  .:|...|:.::..:|.:: .:|..|....|.||.|      |.:
  Fly    76 GAGSPNEL---DRNLRISL--DDRELWLRFQNLTNEMIVTKNGRRMFPVVKISASGLDPAAMYTV 135

  Fly  1511 AASVATSTTSAFASSSGKSTPVCTAK---TNSASTKNKSSATG---IRSNIEFRKV----NHNDV 1565
            ........:..:...:|:..|...|:   :|......:|...|   ::..|.|.||    ..|..
  Fly   136 LLEFVQIDSHRWKYVNGEWVPGGKAEVPPSNPIYVHPESPNFGAHWMKEPISFAKVKLTNKTNGN 200

  Fly  1566 DELQIPELHQTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQF--FPNA 1628
            .::.:..||:.:.|..::.:..:..|:....|.:    |:..:|.....|....:|:::  |..|
  Fly   201 GQIMLNSLHKYEPRVHLVRVGSEQRHVVTYPFPE----TQFIAVTAYQNEEVTSLKIKYNPFAKA 261

  Fly  1629 PYDAFVTPSS--KKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSMAFWV 1691
            ..||...|.:  ....::|.|   :|||                                     
  Fly   262 FLDAKERPDTLYPHDTHYGWL---IPPP------------------------------------- 286

  Fly  1692 LQINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIE---------------KNQ 1741
                  .|:   |.:.|.:||....:|....|| |...||..|.|..               .::
  Fly   287 ------THY---TAAAAAVAAPPPLSIAQSHGL-VASCPSVSSAESVGPSSGGSCDRYGRSLSSR 341

  Fly  1742 DEVP--------PVVVIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFT----------- 1787
            ...|        |.||..|......|..... ..|.....:|........||..           
  Fly   342 SVAPTRTTPYSRPRVVSGSGSNGSAGNASST-SPQPPSAPQTPTSLHSTSTGSVSTSVSSSSGGG 405

  Fly  1788 IQTLPS----------SGALQITISDSAETSSHPAKDVNTCHFSGGFMPFIANVPAKFGETAPTT 1842
            |.:.||          ||.:.:..|.:|...|:|    ::...:|.:.. ..:||........:.
  Fly   406 IGSAPSTGCFSSSYAQSGFMSVDASPTASVFSYP----SSWQSNGNYWN-ATSVPGPMPMNVCSG 465

  Fly  1843 QFLTPQVQVTTSQSGPETLTSSSS---SHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQ 1904
            :.::.....:.:...|...|||.|   .||......|   |.:..:::.:||..||...|....|
  Fly   466 RNISSHNSPSPTNGSPSYTTSSPSYTIHHLTPHSHQY---NMAQTDIYGTGVGVGGGAGTTGSPQ 527

  Fly  1905 -----------EKTLPNETVQVVKNKKSIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSK 1958
                       ..|..:.|.|:..|    |:......::.:||.....:.|...:.  |:.:.:.
  Fly   528 AAYGAAAHQVYHPTPTSPTHQLYTN----AVLNAPSALSYSASGWHNGSGAEYGLY--QNAAAAY 586

  Fly  1959 VAP---PIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQPVACDKPPLVSGSTL 2020
            ..|   |:..|..|.|..                 |.:....:..|:    .|..||....||.:
  Fly   587 YQPEYIPLEIGYATHPLE-----------------PVDVSKTLDDPQ----AAMYKPSDEQGSVI 630

  Fly  2021 PALVEPSARKS-----LPSKPLAAGEHLRPR---------QSLPAKVTANPPAAA 2061
            ......|:.||     :.|..|   ||...|         .|:|..|....||.|
  Fly   631 TLECASSSLKSSHDIKIESSSL---EHAGERGTVGGGAAVVSVPTAVVNGAPAVA 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
bynNP_524031.2 TBOX 86..268 CDD:238106 36/187 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.000

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