DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx1

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_005168668.1 Gene:tbx1 / 368206 ZFINID:ZDB-GENE-030805-5 Length:519 Species:Danio rerio


Alignment Length:512 Identity:98/512 - (19%)
Similarity:174/512 - (33%) Gaps:170/512 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1469 TSL---LMKNRSRDLKRKSQADERLLP--SGPSMTK---------------SSKPSAGGYPIAAS 1513
            |||   .::|.||.:|.......|.:.  |.|.:|:               ||..:.|.|.::.|
Zfish    36 TSLDKQAVQNCSRYIKMHYSTVTREMEAISSPWLTQLSHFCDVAAFTTSSLSSLNTPGSYHLSPS 100

  Fly  1514 VA----------------------TSTTSAFASSSGKSTPVCTAKTNSASTKNKSSATGIRSNIE 1556
            ..                      :.:.||.|.:.|.|.....:.::|:||.||   |.::.|.:
Zfish   101 PGDPYSHHESQFEPCPAAQHAYNYSGSNSAQAPAQGDSGTSNCSSSSSSSTPNK---TLVKKNPK 162

  Fly  1557 FRKVNHNDVDELQIPELHQTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQKVVK 1621
            ...:|    .:|::..|      |      |:|:              ::.:.|.|.:..:::. 
Zfish   163 VANIN----VQLEMKAL------W------DEFN--------------QLGTEMIVTKAGRRMF- 196

  Fly  1622 LQFFPNAPYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRS 1686
                          |:.:.||:    .:|.....::|:.                .:||...|..
Zfish   197 --------------PTFQVKIF----GMDPMADYMLLMD----------------FLPVDDKRYR 227

  Fly  1687 MAF----WVL------QINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIEKNQ 1741
            .||    |::      ...|:||:..|  |.||.|...|..:    ..:.||:.:.|   ::.|.
Zfish   228 YAFHSSSWLVAGKADPATPGRVHYHPD--SPAKGAQWMKQIV----SFDKLKLTNNL---LDDNG 283

  Fly  1742 DEVPPVVVIDSDEEDDDGERQLVIDEQDDEQ--AETDVKQEV-ERTGFTIQTLPSSGALQITISD 1803
            .     ::::|..........:.:|.:.|.:  ||.:.|..| |.|.||..|     |.|.....
Zfish   284 H-----IILNSMHRYQPRFHVVYVDPRKDSEKYAEENYKTFVFEETRFTAVT-----AYQNHRIT 338

  Fly  1804 SAETSSHP-AKDVNTC--------HFSGGFMPFIANVPAKFGETAPTTQFLTPQVQVTTSQSGPE 1859
            ..:.:|:| ||....|        |..|......|....:...::|      ||      |:|.|
Zfish   339 QLKIASNPFAKGFRDCDPEDWPRNHRPGSLQIMSAFARTRNPMSSP------PQ------QNGTE 391

  Fly  1860 TLTSSSSSHLPASKSAYPKINESLQELFSSGVPP-----GGITITKVDSQEKTLPNE 1911
              ...|........|..|..::...:|.|..:.|     ||:....:.:..::.|:|
Zfish   392 --KEDSRREYDRDPSGNPLHSDPTHQLMSRVLSPALPVLGGLHAVPLTAGPRSPPHE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx1XP_005168668.1 TBOX 165..355 CDD:238106 50/273 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574525
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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