DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and org-1

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001285019.1 Gene:org-1 / 31778 FlyBaseID:FBgn0021767 Length:699 Species:Drosophila melanogaster


Alignment Length:543 Identity:108/543 - (19%)
Similarity:176/543 - (32%) Gaps:193/543 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly  1407 LRHMQGNACTKPTPMTHPLL-TKKINVLCSLLVKQRVRENEKKTLGDGSGAPYEVLAGDVSPQTS 1470
            :.|:.|     ||.....:: |..:..|.:.|.......|:..|      :||  :.|.:||...
  Fly     1 MTHLMG-----PTECAGAMMTTTSMQFLDTSLTDYNCYGNDYWT------SPY--MTGGLSPMKQ 52

  Fly  1471 L------LMKNRSRDLKRKSQADERLL------------------------PSGPSMTKSSKPS- 1504
            :      ..|:|| ..|...|.|.:|.                        ||.|..:.||..| 
  Fly    53 IEACIQTAGKDRS-SYKPLEQIDAKLADIETHSTGSTGTANSNSSTSSISNPSCPDQSSSSSSSS 116

  Fly  1505 -------AGGY------PIAASVATSTTSAFASSSGKSTPVCTAKTNSASTKNKSSATGIRSNIE 1556
                   ||.:      |.|...|.:||||    .|.|....:.|......|:.:||    .|..
  Fly   117 VSLPTDYAGVHSEASMAPTAGGTAVTTTSA----GGVSASTASKKFKGQHKKDNNSA----ENGT 173

  Fly  1557 FRKVNHN---DVDELQIPELHQTDHRWVVLD---IFDDFSHIFVPSFSDMISLT----RIHSVMQ 1611
            .:..:||   ...|...|.|.|.   .|||:   ::|.|.    ...::|| :|    |:....|
  Fly   174 VKPNSHNISKGESEPVHPSLAQA---IVVLETKALWDQFH----AQGTEMI-ITKTGRRMFPTFQ 230

  Fly  1612 VAEERQKVVKLQFFPNAPYDA---FVTPSSKKKIY------------FGPLSLDMPPPVLV---- 1657
            |     ::..|.  |:|.|..   ||....|:..|            ..|:|   ||.:.|    
  Fly   231 V-----RIGGLD--PHATYICMMDFVPMDDKRYRYAFHNSCWVVAGKADPIS---PPRIHVHPDS 285

  Fly  1658 ---------LLQSVDR-KMMLREVYQREHSIPVQRHRRSMAFWVLQI---NGQV-------HFEI 1702
                     .:.|.|: |:...::.:..|.|....||....|.::.:   |..:       ||..
  Fly   286 PAVGSNWMKQIVSFDKLKLTNNQLDENGHIILNSMHRYQPRFHLVYLPPKNASLDENEHSSHFRT 350

  Fly  1703 ----DTESTAKLAAQQK---------------------NAIGTPPGLNVLKIPSQLSVEIEKNQD 1742
                :|..||..|.|.:                     |.:.|..|.::..:..:....:::.| 
  Fly   351 FIFPETSFTAVTAYQNQRVTQLKISSNPFAKGFRDDGTNDVTTGGGSSMSSMSHESQARMKQQQ- 414

  Fly  1743 EVPPVVVIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFTI---------------QTLP 1792
                       ::....::||...:|..:|.:       |||..|.               |...
  Fly   415 -----------QQQQQQQQQLQQQQQQQQQLK-------ERTAATSNFGLSCSELAIEQQQQQQQ 461

  Fly  1793 SSGALQITISDSAETSSHPAKDV 1815
            ..|.||:..:.|:.::|..:.|:
  Fly   462 QQGVLQLPATPSSSSTSGNSPDL 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
org-1NP_001285019.1 TBOX 195..389 CDD:238106 41/211 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439067
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11267
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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