DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx19

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001381159.1 Gene:Tbx19 / 304935 RGDID:1310145 Length:448 Species:Rattus norvegicus


Alignment Length:459 Identity:87/459 - (18%)
Similarity:143/459 - (31%) Gaps:141/459 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1712 AQQKNAIGTPPG-LNVLKIPSQLSVEIEKNQDEVPPVVVIDSDEEDDDGERQLVIDEQDDE--QA 1773
            |.||:..||... |||  :.|:|....||.                |..|:||.|..:|..  |.
  Rat     7 ATQKSGEGTVSRLLNV--VESELQAGREKG----------------DPTEKQLQIILEDAPLWQR 53

  Fly  1774 ETDVKQE--VERTG---FTIQTLPSSG----ALQITISDSAETSSHPAKDVN------------- 1816
            ..:|..|  |.:.|   |.:..:..:|    |:...:.|...|.||..|.||             
  Rat    54 FKEVTNEMIVTKNGRRMFPVLKISVTGLDPNAMYSLLLDFVPTDSHRWKYVNGEWVPAGKPEVSS 118

  Fly  1817 -TCHF----SGGFMPFIANVPAKFGETAPTTQF-------------LTPQVQV---------TTS 1854
             :|.:    |..|.......|..|.:...|.:.             ..|||.:         ..:
  Rat   119 HSCVYIHPDSPNFGAHWMKAPISFSKVKLTNKLSGGGQIMLNSLHKYEPQVHIVRVGGAHRMVMN 183

  Fly  1855 QSGPET----LTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQV 1915
            .|.|||    :|:..:..:.|.|..|....::.                 :|::|:....|..:.
  Rat   184 CSFPETQFIAVTAYQNEEITALKIKYNPFAKAF-----------------LDAKERNHLKEIPEA 231

  Fly  1916 VKNKKSIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSKVAPPIRPGA-----------TT 1969
            |...:.:..:.:...:........|..:|......|    :...||..|.|.           ..
  Rat   232 VSESQHVTYSHLGGWILSNPDGMCTTGSANYQYATP----LPLPAPHTRHGCEHYAGLRGHRQAP 292

  Fly  1970 QPKTLVRLYPKPA------------LAAGRKSLPANAKTP----VATPRQSQPVACDKPPLVSGS 2018
            .|...:.....|:            :.:|.:|..:....|    ::.|..|.|:.....|     
  Rat   293 YPSAYMHRNHSPSVNLIESSSNNLQVFSGPESWTSLPSAPHGGILSVPHTSGPINPGPSP----- 352

  Fly  2019 TLPALVEPSARKSLPSKPLAAGEHLRPRQS---LPAKVTANPPAAARPDAASTSA-------QNL 2073
             .|.|...|   :....|:|:|..:....|   |....|...|::..|..|:|||       .:|
  Rat   353 -YPCLWTIS---NGGGGPVASGSEVHASASGTFLLGSPTVTSPSSLLPTQATTSAGVEVLGEPSL 413

  Fly  2074 TNVS 2077
            |:::
  Rat   414 TSIA 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 24/149 (16%)
Tbx19NP_001381159.1 T-box_TBX19-like 36..218 CDD:410327 37/198 (19%)
Blue background indicates that the domain is not in the aligned region.

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