DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx5

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001009964.1 Gene:Tbx5 / 304514 RGDID:1305702 Length:517 Species:Rattus norvegicus


Alignment Length:542 Identity:107/542 - (19%)
Similarity:177/542 - (32%) Gaps:174/542 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1623 QFFPNAPYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSM 1687
            |.||:  |...||..:.|..|             :||..:               :|...||...
  Rat    82 QMFPS--YKVKVTGLNPKTKY-------------ILLMDI---------------VPADDHRYKF 116

  Fly  1688 A--FWVL------QINGQVHFEIDTESTA-----KLAAQQK----NAIGTPPGLNVLKIPSQLSV 1735
            |  .|.:      .:.|:::...|:.:|.     :|.:.||    |....|.|..:|.       
  Rat   117 ADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILN------- 174

  Fly  1736 EIEKNQDEVPPVVVIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFTIQTLPSSGALQIT 1800
            .:.|.|   |.:.::.:||.:..|.:                     .|.|.....|.:..:.:|
  Rat   175 SMHKYQ---PRLHIVKADENNGFGSK---------------------NTAFCTHVFPETAFIAVT 215

  Fly  1801 ISDSAETSSHPAKDVNTCHFSGGF-------MPFIANVPAKFGETAPTTQFLTPQVQVTT-SQSG 1857
               |.:........:....|:.||       :..::.:.:|.....|.:   |.:.:|.. |...
  Rat   216 ---SYQNHKITQLKIENNPFAKGFRGSDDLELHRMSRMRSKEYPVVPRS---TVRHKVANHSPFS 274

  Fly  1858 PETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKKSI 1922
            .||...|:||:|.:.......::...|:|..   ||....:.:..||                  
  Rat   275 SETRALSTSSNLGSQYQCENGVSGPSQDLLP---PPNPYPLAQEHSQ------------------ 318

  Fly  1923 AITGIHKQVTKAASSTATVTAARAPVVKP-QSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAAG 1986
             |....|:..:..|||      ..|..|| ..||.|:.....|.|           ||:      
  Rat   319 -IYHCTKRKDEECSST------EHPYKKPYMETSPSEEDTFYRSG-----------YPQ------ 359

  Fly  1987 RKSLPANAKTPVATPRQSQPVACDKPPLVSGSTLPALVEPSAR--KSLPSKPLAAGEHLRPRQSL 2049
            ::.|..:.:|..| .||:...|...||   ...:|:|.:.|..  .|:||........::|...|
  Rat   360 QQGLSTSYRTESA-QRQACMYASSAPP---SEPVPSLEDISCNTWPSMPSYSSCTVTTVQPMDRL 420

  Fly  2050 P-----AKVTANP--PAAA------RPDAASTSAQNLTNVSKAQLAKEEICYGIMVAKDLPRFRA 2101
            |     |..|:.|  |..|      .|.......|:.|:|:...:.::  |.        |:...
  Rat   421 PYQHFSAHFTSGPLVPRLAGMANHGSPQLGEGMFQHQTSVTHQPVVRQ--CG--------PQTGL 475

  Fly  2102 KVEGSDFMIKIPE----HGVFR 2119
            :..||   ::.||    |||.|
  Rat   476 QSPGS---LQPPEFLYTHGVPR 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
Tbx5NP_001009964.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..46
TBOX 53..241 CDD:238106 39/222 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 270..313 11/45 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..369 14/60 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335243
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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