DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and tbxta

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_571237.1 Gene:tbxta / 30399 ZFINID:ZDB-GENE-980526-437 Length:423 Species:Danio rerio


Alignment Length:580 Identity:102/580 - (17%)
Similarity:169/580 - (29%) Gaps:222/580 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1385 EKTNRLAVVMQGRQSFWLVKGFLRHMQGNACTKPTPMTHPLLTKKINVLCSLLVKQRVRENEKKT 1449
            |.||.:.|...||:.|.:::..:..:..||                  :.|:|:.....:|.:..
Zfish    50 ELTNEMIVTKTGRRMFPVLRASVTGLDPNA------------------MYSVLLDFVAADNNRWK 96

  Fly  1450 LGDGSGAPYEVLAGDVSPQTSLLMKNRSRDLKRKSQADERLLPSGPSMT--KSSKPSAGGYPIAA 1512
            ..:|...|    .|...||:                         ||..  ....|:.|.:.:.|
Zfish    97 YVNGEWVP----GGKPEPQS-------------------------PSCVYIHPDSPNFGAHWMKA 132

  Fly  1513 SVATSTTSAFASSSGKSTPVCTAKTNSASTKNKSSATGIRSNIEFRKVNHNDVDELQIPELHQTD 1577
            .|:.|                     .....||.:..|                ::.:..||:.:
Zfish   133 PVSFS---------------------KVKLSNKLNGGG----------------QIMLNSLHKYE 160

  Fly  1578 HRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQFFPNAPYDAFVTPSSKKKI 1642
            .|                     |.:.::..:       ||::..|.||...:.| ||....::|
Zfish   161 PR---------------------IHIVKVGGI-------QKMISSQSFPETQFIA-VTAYQNEEI 196

  Fly  1643 YFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRS-MAFWVLQINGQVHFEIDTES 1706
              ..|.:...|.....|.:.:|... :||  .:||...|:...| :..|.|..||.:        
Zfish   197 --TALKIKHNPFAKAFLDAKERSDH-KEV--PDHSTDNQQSGYSQLGGWFLPSNGPM-------- 248

  Fly  1707 TAKLAAQQKNAIGTPPGLNVLKIPSQLS----VEIEKNQDEVP-PVVVIDSDEEDDDGERQLVID 1766
                     ....:||..|...:.|..|    ....:|....| |                    
Zfish   249 ---------GPSSSPPQFNGAPVHSSGSYCERYSSLRNHRAAPYP-------------------- 284

  Fly  1767 EQDDEQAETDVKQEVERTGFTIQTLPSSGALQITISDSAETSSHPAKDV-NTCHFSGGFMPFIAN 1830
             .......|.....::.:..::.:..|..||||..|....|.:|..... ||..:     |.:.:
Zfish   285 -SHYSHRSTTTNNYMDNSSGSLASHDSWSALQIPNSSGMGTLAHTTNTTSNTSQY-----PSLWS 343

  Fly  1831 VPAKFGETAPTTQFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAYPKINESL-----QELFSSG 1890
            |       |.||  |||....:.|.:|..|     |..|..|..:|..:..||     ..::..|
Zfish   344 V-------AGTT--LTPSGSASGSITGGLT-----SQFLRGSSMSYSGLTSSLPVSSPSSMYDPG 394

  Fly  1891 VPPGGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKAASSTATVTAARAPVVK 1950
            :...|:.    |:|.:                             ||.|.:||:.|||.:
Zfish   395 LSEVGVG----DAQFE-----------------------------SSIARLTASWAPVAQ 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbxtaNP_571237.1 TBOX 34..216 CDD:238106 43/280 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..234 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 280..304 3/44 (7%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574529
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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