DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and tbx16

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_571133.1 Gene:tbx16 / 30264 ZFINID:ZDB-GENE-990615-5 Length:470 Species:Danio rerio


Alignment Length:382 Identity:71/382 - (18%)
Similarity:115/382 - (30%) Gaps:131/382 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 YRHIKRKYPVSKDFLHSNWWNVERFIVYALSPRCVIRNY-----------------AWRRRRTRS 65
            :|:..|.:.|..|.|:|..|:|.:...:..:....:..|                 .:|...|.|
Zfish   154 HRYHPRFHIVQADDLYSVRWSVFQTFTFPETSFTAVTAYQNTKITKLKIDHNPFAKGFRDEGTNS 218

  Fly    66 VCIIRRVRILLFDPRLKRMIKRRLQNVRHWSKGLVNYYKKMGRIEEHEETEVYRVAEPLAAEELS 130
                            ||...|.|.:....:       |||.:..||...:   ..:|.:.|.|.
Zfish   219 ----------------KRRANRNLPDPERVA-------KKMSKDSEHGSPQ---DVQPSSCEALD 257

  Fly   131 KQMKQQLELLKTGKRSLSLIEETTAIAEVP--------------PKKPKQFPDITEEARVINDSD 181
            .:        ..|::.|    |..|....|              |:.|.              ..
Zfish   258 DE--------HAGRKEL----EVKAERYSPWGGACDRDSGHALRPESPL--------------GS 296

  Fly   182 DRLDAAPSKQAAERTPTKSPAQVAASEDVPTPATPSKEQSGQTSTCSSAEKTDKVEKVGGGSKFL 246
            |..|...|:|......|..|.:.......|:|:  |....|.:|.|.||.:.....:|      |
Zfish   297 DHRDVYSSEQLVPGQNTYQPYRFHEYGKSPSPS--SSSSVGGSSACGSAGRPSFESRV------L 353

  Fly   247 DMLI-------SKVRVKNFARENNMPAEPSAVTFCTSEDEGSADFVG-FDESVHQ--PGMLLTPL 301
            |:..       ||   .:.|.|.::|..|||         |..::.| .:.::.|  ||||.|..
Zfish   354 DVATVPDTDSSSK---PSSAPEFSLPPHPSA---------GHQEYAGVLNMAITQAKPGMLGTHP 406

  Fly   302 VPNNCKTTEGNSAFVSESLDAY----MREHHINDSDSQDDKDKLLEPMGHDGQVTSH 354
            :.::..|.:....:...:...|    ...||:              |..:..|...|
Zfish   407 LYSHYSTEQSLGQWSGAAASQYPPPPPPHHHL--------------PTEYSSQAVHH 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx16NP_571133.1 TBOX 30..217 CDD:238106 10/62 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574523
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.