DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx16l

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_017211524.1 Gene:tbx16l / 30254 ZFINID:ZDB-GENE-980526-171 Length:492 Species:Danio rerio


Alignment Length:453 Identity:89/453 - (19%)
Similarity:141/453 - (31%) Gaps:147/453 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1626 PNAPYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSMAFW 1690
            |:.|...|:.|             |.|.|        .:|.|         ..|:..|:..:...
Zfish   124 PHLPNRFFIHP-------------DSPAP--------GQKWM---------QYPISFHKLKLTNN 158

  Fly  1691 VLQINGQVHFEIDTESTAKLAAQQKNAIGTP--PGLNV-LKIPSQLSVEIEKNQDEVPPVVVIDS 1752
            .|..||.|......:...:|...|.....||  ||..: ...|....:.:...|::....:.||:
Zfish   159 TLNSNGLVVLHSMHKYQPRLHIVQSPDPCTPHNPGAYLRFTFPEAAFIAVTAYQNQEITKLKIDN 223

  Fly  1753 DE-----EDDDGERQLVIDEQDDEQAETDVKQEVERTGFTIQTLPSSGALQITIS-DSAETSSHP 1811
            :.     .|:...|:...|:...|..:||.:.:::.|......:.::|..|:... |.:.:||..
Zfish   224 NPFAKGFRDNGLNRKRFRDKGTQEMQDTDRQVKLDLTANECGIISTAGMSQMVEDVDVSVSSSVD 288

  Fly  1812 AKDVNTCHFSGGFMPFIANVPAKFGETAPTTQFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAY 1876
            .:|..... |....|||             :.|..|......:.....||.|.|:.|        
Zfish   289 CRDTQNSS-SVSLNPFI-------------SAFTNPSSAGGAAAHQTHTLLSLSNRH-------- 331

  Fly  1877 PKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKAASSTATV 1941
                      |||                   |.|:     |..|:...     :..:..||...
Zfish   332 ----------FSS-------------------PRES-----NLNSVCAA-----LPVSQLSTGHT 357

  Fly  1942 TAARAPVVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQP 2006
            :.:|   :.||.|..:.     ||....||       |.|:|......|    :.|:        
Zfish   358 SFSR---LNPQETHHNS-----RPKIQLQP-------PHPSLQCHDLEL----RLPL-------- 395

  Fly  2007 VACDKPPLVSGSTLPALVEPSARKSLPSKPLAAGEHLRP----------RQSLPA-KVTANPP 2058
                 ||.:|...|    ..||.::|...||:...:.||          |.|.|: |:..|||
Zfish   396 -----PPKLSRVQL----SESALRNLEMSPLSDCANPRPLTNILNRSCFRASTPSGKLLPNPP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 29/130 (22%)
tbx16lXP_017211524.1 T-box 49..232 CDD:469628 25/137 (18%)
Blue background indicates that the domain is not in the aligned region.

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