DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx16l

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_017211524.1 Gene:tbx16l / 30254 ZFINID:ZDB-GENE-980526-171 Length:492 Species:Danio rerio


Alignment Length:453 Identity:89/453 - (19%)
Similarity:141/453 - (31%) Gaps:147/453 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1626 PNAPYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSMAFW 1690
            |:.|...|:.|             |.|.|        .:|.|         ..|:..|:..:...
Zfish   124 PHLPNRFFIHP-------------DSPAP--------GQKWM---------QYPISFHKLKLTNN 158

  Fly  1691 VLQINGQVHFEIDTESTAKLAAQQKNAIGTP--PGLNV-LKIPSQLSVEIEKNQDEVPPVVVIDS 1752
            .|..||.|......:...:|...|.....||  ||..: ...|....:.:...|::....:.||:
Zfish   159 TLNSNGLVVLHSMHKYQPRLHIVQSPDPCTPHNPGAYLRFTFPEAAFIAVTAYQNQEITKLKIDN 223

  Fly  1753 DE-----EDDDGERQLVIDEQDDEQAETDVKQEVERTGFTIQTLPSSGALQITIS-DSAETSSHP 1811
            :.     .|:...|:...|:...|..:||.:.:::.|......:.::|..|:... |.:.:||..
Zfish   224 NPFAKGFRDNGLNRKRFRDKGTQEMQDTDRQVKLDLTANECGIISTAGMSQMVEDVDVSVSSSVD 288

  Fly  1812 AKDVNTCHFSGGFMPFIANVPAKFGETAPTTQFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAY 1876
            .:|..... |....|||             :.|..|......:.....||.|.|:.|        
Zfish   289 CRDTQNSS-SVSLNPFI-------------SAFTNPSSAGGAAAHQTHTLLSLSNRH-------- 331

  Fly  1877 PKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKAASSTATV 1941
                      |||                   |.|:     |..|:...     :..:..||...
Zfish   332 ----------FSS-------------------PRES-----NLNSVCAA-----LPVSQLSTGHT 357

  Fly  1942 TAARAPVVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQP 2006
            :.:|   :.||.|..:.     ||....||       |.|:|......|    :.|:        
Zfish   358 SFSR---LNPQETHHNS-----RPKIQLQP-------PHPSLQCHDLEL----RLPL-------- 395

  Fly  2007 VACDKPPLVSGSTLPALVEPSARKSLPSKPLAAGEHLRP----------RQSLPA-KVTANPP 2058
                 ||.:|...|    ..||.::|...||:...:.||          |.|.|: |:..|||
Zfish   396 -----PPKLSRVQL----SESALRNLEMSPLSDCANPRPLTNILNRSCFRASTPSGKLLPNPP 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx16lXP_017211524.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574524
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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