DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx2b

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_571126.1 Gene:tbx2b / 30253 ZFINID:ZDB-GENE-990726-27 Length:687 Species:Danio rerio


Alignment Length:795 Identity:147/795 - (18%)
Similarity:230/795 - (28%) Gaps:303/795 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly  1414 ACTKPTP----------MTHPLLT-----KKINVLCSLLVKQRVRENEKKTL------------- 1450
            |.|||.|          ..||.|:     ..:..|.||..::.|.::.|.||             
Zfish    47 ALTKPIPDHTLAGAAEAGLHPALSHHHQAAHLRSLKSLEPEEEVEDDPKVTLEAKDLWDQFHKLG 111

  Fly  1451 --------GDGSGAPYEVLAG--DVSPQTSLLMKNRSRDLKRKSQADERLLPSG---PSMTK--- 1499
                    |.....|::|...  |...:..|||...:.|..|....:.|.:.:|   |.|.|   
Zfish   112 TEMVITKSGRRMFPPFKVRINGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMY 176

  Fly  1500 --SSKPSAGGYPIAASVATSTTSAFASSSGKSTPVCTAKTNSASTKNKSSATGIRSNIE--FRKV 1560
              ...|:.|...:|..||......               ||:.|.|:..:........:  |..|
Zfish   177 IHPDSPATGEQWMAKPVAFHKLKL---------------TNNISDKHGFTILNSMHKYQPRFHIV 226

  Fly  1561 NHNDVDELQIPELHQTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQFF 1625
            ..||:  |::|              :..|.....|. :|.|::|        |.:..|:.:|: .
Zfish   227 RANDI--LKLP--------------YSTFRTYVFPE-TDFIAVT--------AYQNDKITQLK-I 265

  Fly  1626 PNAPY-----DAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRR 1685
            .|.|:     |.......|:|      .|.:|              .|| :|:.:          
Zfish   266 DNNPFAKGFRDTGNGRREKRK------QLTLP--------------SLR-MYEDQ---------- 299

  Fly  1686 SMAFWVLQINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVVVI 1750
                          .::|.:.....|:..:...|...|.:    |..:|..:..|:.........
Zfish   300 --------------CKVDRDGADSDASSSEPTTGRDAGHS----PGPVSSPLRFNRGSRDDKTCT 346

  Fly  1751 DSDEEDD-------------------------DGERQLVIDEQDDEQAETDVKQEVERTGFTIQT 1790
            ||:.|.|                         |..|:..|.|:.|:..::   ::...:.|:|:.
Zfish   347 DSEHEMDHQNDRCGGSSSPAPKPSSPFRSRSEDWGREKPIAEKKDDYPDS---RKTSDSIFSIRN 408

  Fly  1791 LPSSGALQITISDSAETSSHPAKDVNTCHFSG---GFMPFIANV--PAKFG---------ETAPT 1841
            | ....|:   |.|.:.:....||......||   .|.|.:...  |:.||         ....:
Zfish   409 L-EKDKLE---SRSRKDTDSSKKDTENSGISGSKDSFSPLMVQTESPSHFGAGHLQSLALSGLHS 469

  Fly  1842 TQFLTPQVQVTTSQ----------SGPETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGI 1896
            .||..|   :.|.|          ..|...::....||.||.|.            :.|:..|.:
Zfish   470 QQFFNP---LNTGQPLLFHPGQFAMAPGAFSAMGMGHLLASVSG------------AGGLENGSL 519

  Fly  1897 TITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSKVAP 1961
            :.....|.....|....|     ..:|..||                                  
Zfish   520 SAQGTGSTPSPFPFHLSQ-----HMLASQGI---------------------------------- 545

  Fly  1962 PIRPGATTQPKTLVRLYPKP-----ALAAGRKSLPANAKTPVATPRQSQPVACDKPPLVSGST-- 2019
            |:        .|...|:|.|     |.||...:|||::.|..:..|.         |.:|.||  
Zfish   546 PM--------PTFGGLFPYPYTYMAAAAAAASALPASSSTASSLSRN---------PFLSSSTRP 593

  Fly  2020 --------LPALVEPSAR---KSLPS--KPLAAGEHLRPRQSLPAKVTANPPAAARPDAASTSAQ 2071
                    ||..:..|..   ..|||  .|.:.......|::.|.           ||..|.::|
Zfish   594 RLRFNPYQLPVSIPQSTNLLTTGLPSGLNPSSESSKCGSREASPV-----------PDHKSGASQ 647

  Fly  2072 NLTNVSKAQLAKEEI 2086
            .  |.|.....||.|
Zfish   648 R--NGSPKTTMKESI 660

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx2bNP_571126.1 TBOX 95..278 CDD:238106 43/223 (19%)
TBX 294..361 CDD:204975 13/95 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..452 28/159 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..687 15/63 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574520
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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