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Protein Alignment ocm and Tbx22
DIOPT Version :9
Sequence 1: | NP_001188998.1 |
Gene: | ocm / 37874 |
FlyBaseID: | FBgn0266083 |
Length: | 2175 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_006257221.1 |
Gene: | Tbx22 / 302369 |
RGDID: | 1589764 |
Length: | 533 |
Species: | Rattus norvegicus |
Alignment Length: | 172 |
Identity: | 38/172 - (22%) |
Similarity: | 67/172 - (38%) |
Gaps: | 32/172 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 1748 VVIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFT-IQTLPSSGALQITISDSAETSSHP 1811
|.:.::|.||.| .:::......:....|.:|..|...: ||:.|:.|....:..::..|:...
Rat 212 VKLTNNEMDDKG--HIILQSMHKYKPRVHVVEEDSRIDLSLIQSFPTEGVKTFSFKETEFTTVTA 274
Fly 1812 AKD-------VNTCHFSGGFMPFIANVPAK-------FGETAPTTQFLTPQVQ--VTTSQSGPET 1860
.:: ::...|:.||.. |.: |.||.|.....|...: |..:|:|
Rat 275 YQNQQITKLKIDRNPFAKGFRD-----PGRNRGVLDGFLETYPWRPSFTMDFKPFVPDTQNG--- 331
Fly 1861 LTSSSSSHLPASKSAYPKINESLQELFSSG---VPPGGITIT 1899
||.||.:.:|..|...:|..|....|.. :||..|.:|
Rat 332 --SSGSSPVTSSGGAPSPLNSLLSPSCSPPTVYIPPSSIGMT 371
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
ocm | NP_001188998.1 |
DUF4801 |
771..821 |
CDD:292677 |
|
Tbx22 | XP_006257221.1 |
TBOX |
105..300 |
CDD:238106 |
17/94 (18%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166335210 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3585 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.830 |
|
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