DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and tbx5a

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001300611.1 Gene:tbx5a / 30071 ZFINID:ZDB-GENE-991124-7 Length:492 Species:Danio rerio


Alignment Length:555 Identity:100/555 - (18%)
Similarity:168/555 - (30%) Gaps:214/555 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DSDD--RLDAAPSKQAAE--RTPTKSPAQVAASEDVPTPATPSKEQ--SGQTSTCSSAEKTDKVE 237
            ||:|  ||..:||....:  :...||..|.||....|:..|...:|  .|........|...|..
Zfish     3 DSEDTFRLQNSPSDSEPKDLQNEGKSDKQNAAVSKSPSSQTTYIQQGMEGIKVYLHERELWTKFH 67

  Fly   238 KVGGGSKFLDMLISKV-----------------RVKNFARENNMPAEPSAVTFCTSE--DEGSAD 283
            :||     .:|:|:|.                 :.|.....:.:||:.....|..::  ..|.|:
Zfish    68 EVG-----TEMIITKAGRRMFPSFKVKVTGLNPKTKYILLMDVVPADDHRYKFADNKWSVTGKAE 127

  Fly   284 FVGFDESVHQPGMLLTPLVPNNCKTTEGNSAFVSESLDAYMREHHINDSDSQDDKDKLLEPMGHD 348
                   ...||.|.  :.|::..|    .|.....|.::.:....|:.         |:|.||.
Zfish   128 -------PAMPGRLY--VHPDSPAT----GAHWMRQLVSFQKLKLTNNH---------LDPFGHI 170

  Fly   349 GQVTSHSMPPPMDMPAVPE--------------ALQRLRTVAERRQYLQRCKNHKMGIINNEANV 399
            ...:.|...|.:.:....|              .......:|     :...:|||:..:..|.|.
Zfish   171 ILNSMHKYQPRIHIVKADENNGFGSKNTAFCTHVFPETAFIA-----VTSYQNHKITQLKIENNP 230

  Fly   400 Y---------RELQRKQRQRKVK-------------IGAMQALQASDSQMPFTR--QGWQAASYV 440
            :         .||.|..|.:..|             :|:        ||.||:.  ||..|:..:
Zfish   231 FAKGFRGSDDMELHRMSRMQSTKEYPVVPRSTVRQRVGS--------SQSPFSGDVQGLSASGAI 287

  Fly   441 ATEHSKYYYQVIQVDGEMVRLPGAQGNNLKREKSPYLSRLSRKEQEELKCSEQCLDARIQQELKV 505
            ::::|            ......:...:|..:.|.|         .|......|:..:::.|   
Zfish   288 SSQYS------------CENGVSSTSQDLLPQSSSY---------HEHTQDYHCIKRKVEDE--- 328

  Fly   506 IPTRVSPPRNPKILNQYPLPAIFRPCPLSKKPLQRPL------DDD--------TAALLLAGG-- 554
                                     ||..:.|.::|.      :||        :.:|.|:||  
Zfish   329 -------------------------CPAGEHPYKKPYVESSSSEDDHYYRPLSYSQSLGLSGGAP 368

  Fly   555 ------------------------SMAVVSMPNVELDVMPQLGR-PLDEIAKRYLQHILPHHDIT 594
                                    |:..:|.|.|....:||:.| |        .||....|..:
Zfish   369 YRPESSQRQACMYASAPQPPEPVPSLEDISWPGVPPYSVPQMERLP--------YQHHFSAHFAS 425

  Fly   595 REWAE------FSVS-------TLQAPPATMKDAE 616
            |:..|      .|||       .:|:|.|.::..|
Zfish   426 RQMPEAHGMYASSVSHQCSPSGGIQSPSAGLQGNE 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx5aNP_001300611.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43 13/39 (33%)
TBOX 52..240 CDD:238106 35/219 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..352 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574532
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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