DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx4

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_570989.3 Gene:tbx4 / 30070 ZFINID:ZDB-GENE-991124-5 Length:543 Species:Danio rerio


Alignment Length:631 Identity:119/631 - (18%)
Similarity:196/631 - (31%) Gaps:205/631 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1439 KQRVRENEKKTLGDGSGAPYEVLAGDVS----PQTSLLMKN--------------RSRDLKRK-- 1483
            |..|..:|..|:....|.|  .||.|.|    |.|....:|              ..|:|.:|  
Zfish     5 KASVVADEGMTVAQSGGRP--ELASDSSHLGLPTTPSNPQNNEPDQSIENIKVVLHDRELWKKFH 67

  Fly  1484 --------SQADERLLPSGPSMTKSSKPSAGGYPIAASVATSTTSAFA------SSSGKSTPVCT 1534
                    ::|..|:.||.........|.. .|.:...:..:....:.      ..:||:.|   
Zfish    68 EAGTEMIITKAGRRMFPSYKVKVTGMNPKT-KYILLTDIVPADDHRYKFCDNKWMVAGKAEP--- 128

  Fly  1535 AKTNSASTKNKSSATG---IRSNIEFRKV----NH---------NDVDELQIPELH--------- 1574
            |..........|.|||   :|..:.|:|:    ||         |.:.:.| |.||         
Zfish   129 AMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQ-PRLHIVKADENNA 192

  Fly  1575 -QTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQFFPNAPYDAFVTPSS 1638
             .:.:......:|.:.:.|.|.|:.:       |.:.|:..|           |.|:......|.
Zfish   193 FGSKNTAYCTHVFHETAFISVTSYQN-------HKITQLKIE-----------NNPFAKGFRGSD 239

  Fly  1639 KKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRH-RRSMAFWVLQINGQV--HF 1700
            :     |.|.:..       ||..|..::.:.:. |:..|....| ...::..||..:.||  |:
Zfish   240 E-----GDLRVSR-------LQGKDYPVISKNMV-RQRLISSHGHLSGKLSAGVLSSHPQVLSHY 291

  Fly  1701 EIDTESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIEKN---QDEVPPVVVIDSDEEDDDGERQ 1762
            :.|:              |.|       :|:..|.|...|   ....|.::.......|:....:
Zfish   292 QYDS--------------GVP-------LPNSDSQEALSNSFTSSREPSLLYHCFKHRDNPRHLE 335

  Fly  1763 L------------VIDEQDDEQAETDVKQEVERTGFTIQTLPSS-----GALQITISDSAETSSH 1810
            |            .:.|:...::.......:....:..:.|.|.     |.|:.....:..|...
Zfish   336 LGCKRPYLDTTSSAVSEEHYFRSPPSYDSPLLSHPYCNEALGSREACMYGGLEGEGGGAVGTDDL 400

  Fly  1811 PAKDVNTCHFSGGFMPFIANVPAKFG-ETAPTTQF--LTPQVQVTTSQSGPETLTSSSSSHLPAS 1872
            ||..:| |:......|:     .::| :|....|:  .|.....|.|.:      |..|.|.|:.
Zfish   401 PAPSLN-CNMWASVQPY-----PRYGMQTVEAMQYQPFTAHFNSTASAA------SMVSHHSPSM 453

  Fly  1873 KSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKKSIAIT-----GIHKQV- 1931
            :..:|             .||..:|.|            |.:|:....|.|.|     |.|.:. 
Zfish   454 QRPHP-------------TPPDLVTFT------------TQRVLPPTPSSASTSPSGSGHHDRAH 493

  Fly  1932 -----TKAAS-----------STATVTAARAPVVKPQSTSVSKVAP 1961
                 .||.|           ||.:.|:.|.|..:.| |.:|.|.|
Zfish   494 SSLFHRKAGSPLRSQRDFTGYSTHSPTSTREPAYQYQ-TGLSSVGP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 13/40 (33%)
tbx4NP_570989.3 None
Blue background indicates that the domain is not in the aligned region.

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