DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx4

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_570989.2 Gene:tbx4 / 30070 ZFINID:ZDB-GENE-991124-5 Length:543 Species:Danio rerio


Alignment Length:631 Identity:119/631 - (18%)
Similarity:195/631 - (30%) Gaps:205/631 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1439 KQRVRENEKKTLGDGSGAPYEVLAGDVS----PQTSLLMKN--------------RSRDLKRK-- 1483
            |..|..:|..|:....|.|  .||.|.|    |.|....:|              ..|:|.:|  
Zfish     5 KASVVADEGMTVAQSGGRP--ELASDSSHLGLPTTPSNPQNNEPDQSIENIKVVLHDRELWKKFH 67

  Fly  1484 --------SQADERLLPSGPSMTKSSKPSAGGYPIAASVATSTTSAFA------SSSGKSTPVCT 1534
                    ::|..|:.||.........|.. .|.:...:..:....:.      ..:||:.|   
Zfish    68 EAGTEMIITKAGRRMFPSYKVKVTGMNPKT-KYILLTDIVPADDHRYKFCDNKWMVAGKAEP--- 128

  Fly  1535 AKTNSASTKNKSSATG---IRSNIEFRKV----NH---------NDVDELQIPELH--------- 1574
            |..........|.|||   :|..:.|:|:    ||         |.:.:.| |.||         
Zfish   129 AMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQ-PRLHIVKADENNA 192

  Fly  1575 -QTDHRWVVLDIFDDFSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQFFPNAPYDAFVTPSS 1638
             .:.:......:|.:.:.|.|.|:.:       |.:.|:..|           |.|:......|.
Zfish   193 FGSKNTAYCTHVFHETAFISVTSYQN-------HKITQLKIE-----------NNPFAKGFRGSD 239

  Fly  1639 KKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRH-RRSMAFWVLQINGQV--HF 1700
            :     |.|.:..       ||..|..::.:.:. |:..|....| ...::..||..:.||  |:
Zfish   240 E-----GDLRVSR-------LQGKDYPVISKNMV-RQRLISSHGHLSGKLSAGVLSSHPQVLSHY 291

  Fly  1701 EIDTESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIEKN---QDEVPPVVVIDSDEEDDDGERQ 1762
            :.|:              |.|       :|:..|.|...|   ....|.::.......|:....:
Zfish   292 QYDS--------------GVP-------LPNSDSQEALSNSFTSSREPSLLYHCFKHRDNPRHLE 335

  Fly  1763 L------------VIDEQDDEQAETDVKQEVERTGFTIQTLPSS-----GALQITISDSAETSSH 1810
            |            .:.|:...::.......:....:..:.|.|.     |.|:.....:..|...
Zfish   336 LGCKRPYLDTTSSAVSEEHYFRSPPSYDSPLLSHPYCNEALGSREACMYGGLEGEGGGAVGTDDL 400

  Fly  1811 PAKDVNTCHFSGGFMPFIANVPAKFG-ETAPTTQF--LTPQVQVTTSQSGPETLTSSSSSHLPAS 1872
            ||..:| |:......|:     .::| :|....|:  .|.....|.|.:      |..|.|.|:.
Zfish   401 PAPSLN-CNMWASVQPY-----PRYGMQTVEAMQYQPFTAHFNSTASAA------SMVSHHSPSM 453

  Fly  1873 KSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKKSIAIT-----GIHKQV- 1931
            :..:|             .||..:|.|            |.:|:....|.|.|     |.|.:. 
Zfish   454 QRPHP-------------TPPDLVTFT------------TQRVLPPTPSSASTSPSGSGHHDRAH 493

  Fly  1932 -----TKAAS-----------STATVTAARAPVVKPQSTSVSKVAP 1961
                 .||.|           ||.:.|..|.|..:.| |.:|.|.|
Zfish   494 SSLFHRKAGSPLRSQRDFTGYSTHSPTPTREPAYQYQ-TGLSSVGP 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx4NP_570989.2 TBOX 52..240 CDD:238106 37/210 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574528
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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