DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx15

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001315362.1 Gene:tbx15 / 246222 ZFINID:ZDB-GENE-020529-1 Length:616 Species:Danio rerio


Alignment Length:184 Identity:44/184 - (23%)
Similarity:62/184 - (33%) Gaps:52/184 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1409 HMQGNACTKPTPMTHPLLTKKINV------LCSLLVKQR---VRENEKKT-----LGDGSGAPYE 1459
            |:...:|:.|   |..|.....||      ||:|.:.:.   .|.|....     |.|||....:
Zfish   361 HLLSPSCSPP---TFHLAPNTFNVGCRESQLCNLGLSEYPACARSNMAALQGYGGLADGSYGRLQ 422

  Fly  1460 VLAGDVSPQTSLLMKNRSRDLKRKSQADERLLPSGPSMTKSSKPSAGGYPIAASVATSTTSAFAS 1524
            ...|.|:                .:||.|..||...|...::....|.:   .|:||. .|...|
Zfish   423 TTGGAVA----------------SAQASESFLPQRTSSLIAAGMQGGAH---GSLATG-NSGSGS 467

  Fly  1525 SSGK---------STP------VCTAKTNSASTKNKSSATGIRSNIEFRKVNHN 1563
            ..||         |.|      |..|..:|||..:.||.:...|...|...:|:
Zfish   468 GGGKMDAYGSQLASFPASQLQYVMQAGASSASGSSASSGSSSSSAHMFSGSHHH 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241
tbx15NP_001315362.1 T-box_TBX15_18_22-like 108..301 CDD:410317
Blue background indicates that the domain is not in the aligned region.

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