DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and Tbx6

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_035668.2 Gene:Tbx6 / 21389 MGIID:102539 Length:436 Species:Mus musculus


Alignment Length:469 Identity:101/469 - (21%)
Similarity:133/469 - (28%) Gaps:192/469 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly  1784 TGFTIQTLPSSGALQITISDS----AETSSHPAKDVNT----CHFSGGFMPFIANVPAKFGETAP 1840
            ||:.:.. |..||      ||    |.|..:...|::|    |..||             .|.||
Mouse    13 TGYRLGH-PQPGA------DSTFPPALTEGYRYPDLDTSKLDCFLSG-------------IEAAP 57

  Fly  1841 TTQFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAYPKINESL--QELFS--SGV---------- 1891
            .|......:.:..|..||||....     |.:..:.|.::.||  |||:.  |.|          
Mouse    58 HTLAAAAPLPLLPSALGPETAPPP-----PEALHSLPGVSLSLENQELWKEFSAVGTEMIITKAG 117

  Fly  1892 ----PPGGITITKVDSQEKTL---------------------------PNETVQVVKNKKSIAIT 1925
                |...:::|.:|.:.:.|                           |....:|..:..|.| |
Mouse   118 RRMFPACRVSVTGLDPEARYLFLLDVVPVDGARYRWQGQHWEPSGKAEPRLPDRVYIHPDSPA-T 181

  Fly  1926 GIHKQVTKAASSTATVTAARAPV----VK-PQST----------SVSKVAPPIRPGATTQ----- 1970
            |.|..              |.||    || ..||          |:.|..|.|.....||     
Mouse   182 GAHWM--------------RQPVSFHRVKLTNSTLDPHGHLILHSMHKYQPRIHLVRATQLCSQH 232

  Fly  1971 ---------PKTL---VRLYPKPAL----------AAGRKSLPANAK--------------TPVA 1999
                     |:|.   |..|..|.:          |.|.:....|.|              .|||
Mouse   233 WGGVASFRFPETTFISVTAYQNPRITQLKIAANPFAKGFRENGRNCKRERDARVKRKLRGPEPVA 297

  Fly  2000 TP--------------------RQSQPVACDKPPLVSGSTLPALVEPSARKSL--PSKPLAAGEH 2042
            |.                    |.|.|.....|...:.::.|....|||...|  |:....|..|
Mouse   298 TEACGSGDTPGGPCDSTLGGDIRDSDPEQAPTPQEAASASAPPCGGPSAEAYLLHPAAFHGAPSH 362

  Fly  2043 LRPRQSLPAKVT--ANPPAAARP---DAASTSAQNLTNVSKAQLAKEEICYGIMVAKDLPRFRAK 2102
                  |||:..  |..|...||   .||....|.....|..|.|..       |....|.|   
Mouse   363 ------LPARTPSFAEAPDPGRPAPYSAAFLDLQPGPGGSAYQAAPS-------VPSFAPHF--- 411

  Fly  2103 VEGSDFMIKIPEHG 2116
            ::|..|.:..|..|
Mouse   412 IQGGPFPLPYPGPG 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 41/197 (21%)
Tbx6NP_035668.2 T-box_TBX6 91..273 CDD:410322 38/196 (19%)
PRK07764 <326..>424 CDD:236090 28/113 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.