DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx5

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_006530342.1 Gene:Tbx5 / 21388 MGIID:102541 Length:537 Species:Mus musculus


Alignment Length:491 Identity:96/491 - (19%)
Similarity:164/491 - (33%) Gaps:148/491 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1636 PSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSMA--FWVL------ 1692
            ||.|.|:    ..|: |....:||..:               :|...||...|  .|.:      
Mouse   104 PSYKVKV----TGLN-PKTKYILLMDI---------------VPADDHRYKFADNKWSVTGKAEP 148

  Fly  1693 QINGQVHFEIDTESTA-----KLAAQQK----NAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVV 1748
            .:.|:::...|:.:|.     :|.:.||    |....|.|..:|.       .:.|.|   |.:.
Mouse   149 AMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILN-------SMHKYQ---PRLH 203

  Fly  1749 VIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFTIQTLPSSGALQITISDSAETSSHPAK 1813
            ::.:||.:..|.:                     .|.|.....|.:..:.:|   |.:.......
Mouse   204 IVKADENNGFGSK---------------------NTAFCTHVFPETAFIAVT---SYQNHKITQL 244

  Fly  1814 DVNTCHFSGGF-------MPFIANVPAKFGETAPTTQFLTPQVQVTTSQS--GPETLTSSSSSHL 1869
            .:....|:.||       :..::.:.:|.....|.:   |.:.:||::.|  ..||...|:||:|
Mouse   245 KIENNPFAKGFRGSDDLELHRMSRMQSKEYPVVPRS---TVRHKVTSNHSPFSSETRALSTSSNL 306

  Fly  1870 PASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKA 1934
            .:.......::...|:|..   ||....:.:..||                   |....|:..:.
Mouse   307 GSQYQCENGVSGPSQDLLP---PPNPYPLAQEHSQ-------------------IYHCTKRKDEE 349

  Fly  1935 ASSTATVTAARAPVVKP-QSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPV 1998
            .|||      ..|..|| ..||.|:.....|.|           ||:      ::.|..:.:|..
Mouse   350 CSST------EHPYKKPYMETSPSEEDTFYRSG-----------YPQ------QQGLSTSYRTES 391

  Fly  1999 ATPRQSQPVACDKPPLVSGSTLPALVEPSAR--KSLPSKPLAAGEHLRPRQSLP-----AKVTAN 2056
            | .||:...|...||   ...:|:|.:.|..  .|:||........::|...||     |..|:.
Mouse   392 A-QRQACMYASSAPP---SEPVPSLEDISCNTWPSMPSYSSCTVTTVQPMDRLPYQHFSAHFTSG 452

  Fly  2057 P--PAAA------RPDAASTSAQNLTNVSKAQLAKE 2084
            |  |..|      .|.......|:.|:|:...:.::
Mouse   453 PLVPRLAGMANHGSPQLGEGMFQHQTSVAHQPVVRQ 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
Tbx5XP_006530342.1 TBOX 72..260 CDD:238106 37/209 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831506
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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