DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx5

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_006530342.1 Gene:Tbx5 / 21388 MGIID:102541 Length:537 Species:Mus musculus


Alignment Length:491 Identity:96/491 - (19%)
Similarity:164/491 - (33%) Gaps:148/491 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1636 PSSKKKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSIPVQRHRRSMA--FWVL------ 1692
            ||.|.|:    ..|: |....:||..:               :|...||...|  .|.:      
Mouse   104 PSYKVKV----TGLN-PKTKYILLMDI---------------VPADDHRYKFADNKWSVTGKAEP 148

  Fly  1693 QINGQVHFEIDTESTA-----KLAAQQK----NAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVV 1748
            .:.|:::...|:.:|.     :|.:.||    |....|.|..:|.       .:.|.|   |.:.
Mouse   149 AMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILN-------SMHKYQ---PRLH 203

  Fly  1749 VIDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFTIQTLPSSGALQITISDSAETSSHPAK 1813
            ::.:||.:..|.:                     .|.|.....|.:..:.:|   |.:.......
Mouse   204 IVKADENNGFGSK---------------------NTAFCTHVFPETAFIAVT---SYQNHKITQL 244

  Fly  1814 DVNTCHFSGGF-------MPFIANVPAKFGETAPTTQFLTPQVQVTTSQS--GPETLTSSSSSHL 1869
            .:....|:.||       :..::.:.:|.....|.:   |.:.:||::.|  ..||...|:||:|
Mouse   245 KIENNPFAKGFRGSDDLELHRMSRMQSKEYPVVPRS---TVRHKVTSNHSPFSSETRALSTSSNL 306

  Fly  1870 PASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKA 1934
            .:.......::...|:|..   ||....:.:..||                   |....|:..:.
Mouse   307 GSQYQCENGVSGPSQDLLP---PPNPYPLAQEHSQ-------------------IYHCTKRKDEE 349

  Fly  1935 ASSTATVTAARAPVVKP-QSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPV 1998
            .|||      ..|..|| ..||.|:.....|.|           ||:      ::.|..:.:|..
Mouse   350 CSST------EHPYKKPYMETSPSEEDTFYRSG-----------YPQ------QQGLSTSYRTES 391

  Fly  1999 ATPRQSQPVACDKPPLVSGSTLPALVEPSAR--KSLPSKPLAAGEHLRPRQSLP-----AKVTAN 2056
            | .||:...|...||   ...:|:|.:.|..  .|:||........::|...||     |..|:.
Mouse   392 A-QRQACMYASSAPP---SEPVPSLEDISCNTWPSMPSYSSCTVTTVQPMDRLPYQHFSAHFTSG 452

  Fly  2057 P--PAAA------RPDAASTSAQNLTNVSKAQLAKE 2084
            |  |..|      .|.......|:.|:|:...:.::
Mouse   453 PLVPRLAGMANHGSPQLGEGMFQHQTSVAHQPVVRQ 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 31/127 (24%)
Tbx5XP_006530342.1 T-box_TBX4_5-like 73..257 CDD:410315 37/206 (18%)
Blue background indicates that the domain is not in the aligned region.

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