DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx4

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_035666.2 Gene:Tbx4 / 21387 MGIID:102556 Length:552 Species:Mus musculus


Alignment Length:566 Identity:106/566 - (18%)
Similarity:180/566 - (31%) Gaps:198/566 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 QAAERTPTKSPAQVAASEDVPTPATPSKEQSG---QTSTCSSAEKTDKVEKVGGGSKFL------ 246
            :|:..:.|.:|....|:..:...|..|....|   ..:..::||:|.:..|||...|.|      
Mouse    23 EASNTSTTNAPEPALATPGLSGAALSSPPGQGADVAAAAAAAAEQTIENIKVGLHEKELWKKFHE 87

  Fly   247 ---DMLISKVRVKNFARENNMPAEPSAVTFCTSEDEGSADFVGFDESVHQPGMLLTPLVPNNCKT 308
               :|:|:|...:.|      |:....||             |.:.....  :||..:||.:   
Mouse    88 AGTEMIITKAGRRMF------PSYKVKVT-------------GMNPKTKY--ILLIDIVPAD--- 128

  Fly   309 TEGNSAFVSESLDAYMREHHINDSDSQDDKDKLLEPMGHDGQVTSHSMPPPMDMPAVPEALQRLR 373
                             :|.....|::.......|| ...|::..|.     |.||......|  
Mouse   129 -----------------DHRYKFCDNKWMVAGKAEP-AMPGRLYVHP-----DSPATGAHWMR-- 168

  Fly   374 TVAERRQYLQRCKNHKMGIINNEANVYRELQRKQRQRKVKIGAMQALQ------ASDSQMPFTRQ 432
                     |.....|:.:.||..:.:..         :.:.:|...|      .:|....|..:
Mouse   169 ---------QLVSFQKLKLTNNHLDPFGH---------IILNSMHKYQPRLHIVKADENNAFGSK 215

  Fly   433 GWQAASYVATEHSKYYYQVIQVDGEMVRLPGAQGNNLKREKSPYLSRLSRKEQEELKCSEQCLDA 497
            .....::|..|.|  :..|.......:       ..||.|.:|:.......:..:|:.      |
Mouse   216 NTAFCTHVFPETS--FISVTSYQNHKI-------TQLKIENNPFAKGFRGSDDSDLRV------A 265

  Fly   498 RIQQELKVIPTRVSPPRNPKILNQYPLPAIFRPCPLSKKPLQRPLDDDTAALLLAGGSMAVVSMP 562
            |:|.:                  :||:        :||..:::.|               |.|..
Mouse   266 RLQSK------------------EYPV--------ISKSIMRQRL---------------VSSQL 289

  Fly   563 NVELDVMPQLGRPLDEIAKRYLQHILPHHDITREWAEFSVSTLQAPPATMKDAEEQ---ASQTPA 624
            :.:.||.|.      ..|.:.|||....:....::|.               ||.|   .:..|.
Mouse   290 SAKPDVSPL------HSAHQALQHYQYENGAHMQFAA---------------AEPQDLPLNTFPT 333

  Fly   625 GRRKSFTFVIPYLNDRNHILVRRVVDRSEHLD----RSFKEEPNKL-QEFTFREMLPPQPDAEIV 684
            .|..|..:         |.|.||  |.:.|||    ||:.|.|:.: .:..||.  ||..|.:::
Mouse   334 QRDSSLFY---------HCLKRR--DSARHLDLPCKRSYLETPSSVGDDHYFRS--PPPYDQQML 385

  Fly   685 A---CAEMISDMINTVAISCSENSFISEDPDALDASSVPKSSDLCP 727
            :   |:|:      |...:|   .:.|..|:....|:|   .||.|
Mouse   386 SPSYCSEV------TPREAC---MYSSSGPEIAGVSAV---DDLPP 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
Tbx4NP_035666.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 5/26 (19%)
TBOX 71..260 CDD:238106 43/264 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831504
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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