DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx3

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_035665.2 Gene:Tbx3 / 21386 MGIID:98495 Length:741 Species:Mus musculus


Alignment Length:640 Identity:126/640 - (19%)
Similarity:214/640 - (33%) Gaps:186/640 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1546 SSATG---IRSNIEFRKVN-HNDVDE-----LQIPELHQT---DHRWVVLDIFDDFSHIFVPSFS 1598
            |.|||   :...:.|.|:. .|::.:     |..|..|.|   ::.:....|.:.. |.:.|.| 
Mouse   190 SPATGEQWMSKVVTFHKLKLTNNISDKHGFTLAFPSDHATWQGNYSFGTQTILNSM-HKYQPRF- 252

  Fly  1599 DMISLTRIHSVMQVAEERQKVVKLQFFPNAPYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVD 1663
               .:.|.:.::::.   ....:...||...:.| ||.....||  ..|.:|..|.......:.:
Mouse   253 ---HIVRANDILKLP---YSTFRTYLFPETEFIA-VTAYQNDKI--TQLKIDNNPFAKGFRDTGN 308

  Fly  1664 -RKMMLREVYQREHSIPVQRHRRSMAFWVLQINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNV- 1726
             |:...:::..:...:..:||::               |...||:::.||....|..:.|.::: 
Mouse   309 GRREKRKQLTLQSMRVFEERHKK---------------ETSDESSSEQAAFNCFAQASSPAVSIV 358

  Fly  1727 ----LK--IPSQL--SVEIEKNQDEVP---PVVVIDSDEEDDDG--------ERQLVIDEQDDEQ 1772
                ||  .||:.  ..|.|..::..|   ....|.:...::.|        ..||.       .
Mouse   359 GTSNLKDLCPSEAESDAEAESKEEHGPEACDAAKISTTTAEEPGRDKGSPATRAQLF-------P 416

  Fly  1773 AETDVKQEVERTGFTIQTLPSSGALQITISDSA----------------------ETSSHPAKDV 1815
            ||....::..|..   :..|.|.....|||.|.                      |..:.||||.
Mouse   417 AEPSRARDTARLD---KASPDSRHSPATISSSTRVPGADERRSPGREGPVATKVDEARAIPAKDA 478

  Fly  1816 ---------NTCHFSGGFMPFIANVPAKFGET----APTTQFLTP---------------QVQVT 1852
                     .|.|.:.|.:|.:...|...|:.    .|.  ||.|               ...:.
Mouse   479 FAPLSVQTDATAHLAQGPLPGLGFAPGLAGQQFFNGHPL--FLHPGQFAMGGAFSSMAAGMGPLL 541

  Fly  1853 TSQSGPETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVK 1917
            .:.||..|..|...|...||.:|...:         ||            :...|||....|.|.
Mouse   542 ATVSGASTGVSGLESTAMASAAAAQGL---------SG------------ASAATLPFHLQQHVL 585

  Fly  1918 NKKSIAITGI-----HKQVTKAASSTATVTAARAPVVKPQSTSVSKVAPPIRPGATTQP------ 1971
            ..:.:|::..     :.....||::.|:..||.:.|.:....:::.:.|.:|....:.|      
Mouse   586 ASQGLAMSPFGSLFPYPYTYMAAAAAASTAAASSSVHRHPFLNLNSMRPRLRYSPYSIPVPVPDS 650

  Fly  1972 -KTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQPVACDKPPLVSGSTLPALVEPSARKSLPSK 2035
             ..|....|..|.|||  .|...|....|:|..   ||.|     |||.|      ::|    |.
Mouse   651 SSLLATALPSMASAAG--PLDGKAAALAASPAS---VAVD-----SGSEL------NSR----SS 695

  Fly  2036 PLAAGEHLRPRQSLPAKVTANPPAAARPDAASTSAQNLTN-VSKAQLAKEEICYG 2089
            .|::|           .|:.:|...:..:||::..|::.. ||..:...:..|.|
Mouse   696 TLSSG-----------SVSLSPKLCSEKEAATSELQSIQRLVSGLEAKPDRSCSG 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
Tbx3NP_035665.2 T-box 105..305 CDD:366363 26/125 (21%)
TBX 323..402 CDD:372213 17/93 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 369..469 17/109 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831496
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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