DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx3

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_035665.2 Gene:Tbx3 / 21386 MGIID:98495 Length:741 Species:Mus musculus


Alignment Length:640 Identity:126/640 - (19%)
Similarity:214/640 - (33%) Gaps:186/640 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1546 SSATG---IRSNIEFRKVN-HNDVDE-----LQIPELHQT---DHRWVVLDIFDDFSHIFVPSFS 1598
            |.|||   :...:.|.|:. .|::.:     |..|..|.|   ::.:....|.:.. |.:.|.| 
Mouse   190 SPATGEQWMSKVVTFHKLKLTNNISDKHGFTLAFPSDHATWQGNYSFGTQTILNSM-HKYQPRF- 252

  Fly  1599 DMISLTRIHSVMQVAEERQKVVKLQFFPNAPYDAFVTPSSKKKIYFGPLSLDMPPPVLVLLQSVD 1663
               .:.|.:.::::.   ....:...||...:.| ||.....||  ..|.:|..|.......:.:
Mouse   253 ---HIVRANDILKLP---YSTFRTYLFPETEFIA-VTAYQNDKI--TQLKIDNNPFAKGFRDTGN 308

  Fly  1664 -RKMMLREVYQREHSIPVQRHRRSMAFWVLQINGQVHFEIDTESTAKLAAQQKNAIGTPPGLNV- 1726
             |:...:::..:...:..:||::               |...||:::.||....|..:.|.::: 
Mouse   309 GRREKRKQLTLQSMRVFEERHKK---------------ETSDESSSEQAAFNCFAQASSPAVSIV 358

  Fly  1727 ----LK--IPSQL--SVEIEKNQDEVP---PVVVIDSDEEDDDG--------ERQLVIDEQDDEQ 1772
                ||  .||:.  ..|.|..::..|   ....|.:...::.|        ..||.       .
Mouse   359 GTSNLKDLCPSEAESDAEAESKEEHGPEACDAAKISTTTAEEPGRDKGSPATRAQLF-------P 416

  Fly  1773 AETDVKQEVERTGFTIQTLPSSGALQITISDSA----------------------ETSSHPAKDV 1815
            ||....::..|..   :..|.|.....|||.|.                      |..:.||||.
Mouse   417 AEPSRARDTARLD---KASPDSRHSPATISSSTRVPGADERRSPGREGPVATKVDEARAIPAKDA 478

  Fly  1816 ---------NTCHFSGGFMPFIANVPAKFGET----APTTQFLTP---------------QVQVT 1852
                     .|.|.:.|.:|.:...|...|:.    .|.  ||.|               ...:.
Mouse   479 FAPLSVQTDATAHLAQGPLPGLGFAPGLAGQQFFNGHPL--FLHPGQFAMGGAFSSMAAGMGPLL 541

  Fly  1853 TSQSGPETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVK 1917
            .:.||..|..|...|...||.:|...:         ||            :...|||....|.|.
Mouse   542 ATVSGASTGVSGLESTAMASAAAAQGL---------SG------------ASAATLPFHLQQHVL 585

  Fly  1918 NKKSIAITGI-----HKQVTKAASSTATVTAARAPVVKPQSTSVSKVAPPIRPGATTQP------ 1971
            ..:.:|::..     :.....||::.|:..||.:.|.:....:::.:.|.:|....:.|      
Mouse   586 ASQGLAMSPFGSLFPYPYTYMAAAAAASTAAASSSVHRHPFLNLNSMRPRLRYSPYSIPVPVPDS 650

  Fly  1972 -KTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQPVACDKPPLVSGSTLPALVEPSARKSLPSK 2035
             ..|....|..|.|||  .|...|....|:|..   ||.|     |||.|      ::|    |.
Mouse   651 SSLLATALPSMASAAG--PLDGKAAALAASPAS---VAVD-----SGSEL------NSR----SS 695

  Fly  2036 PLAAGEHLRPRQSLPAKVTANPPAAARPDAASTSAQNLTN-VSKAQLAKEEICYG 2089
            .|::|           .|:.:|...:..:||::..|::.. ||..:...:..|.|
Mouse   696 TLSSG-----------SVSLSPKLCSEKEAATSELQSIQRLVSGLEAKPDRSCSG 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 30/126 (24%)
Tbx3NP_035665.2 T-box_TBX2_3-like 101..305 CDD:410314 26/125 (21%)
TBX 323..402 CDD:432659 17/93 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 369..469 17/109 (16%)
Blue background indicates that the domain is not in the aligned region.

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