DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Tbx2

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_033350.2 Gene:Tbx2 / 21385 MGIID:98494 Length:711 Species:Mus musculus


Alignment Length:366 Identity:74/366 - (20%)
Similarity:110/366 - (30%) Gaps:137/366 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   916 AAAAAAAAAAAAAAAASAKISAPALSEPCFVKDTDLAKLKHCFVGLRRLSNVENLATFCMTHQLY 980
            |.||||||||||||.|...:||.....|.    ..|..||    .|.....||:           
Mouse    58 AGAAAAAAAAAAAAEAGLHVSALGPHPPA----AHLRSLK----SLEPEDEVED----------- 103

  Fly   981 KCFCGGDSPDGKPVVIEKDQWNAPVTHFNPDLAVRAHYSFERPPEETSTKKKGKEKKPKHK---- 1041
                     |.|..:..|:.|:                .|.:...|....|.|:...|..|    
Mouse   104 ---------DPKVTLEAKELWD----------------QFHKLGTEMVITKSGRRMFPPFKVRVS 143

  Fly  1042 -LESKSS----NDVADQKPQTQAVETLPLKTESKQEPP-PANSLFKDESP--------------- 1085
             |:.|:.    .|:...................|.:|. |.......:||               
Mouse   144 GLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHK 208

  Fly  1086 LKRSNELNKIFNYFRSRPDVCRRAISIPKNSYQRLNQRRADRVRHQIAREESLKTNEMLKMRIQG 1150
            ||.:|.::                   .|:.:..||.....:.|..|.|     .|::||:....
Mouse   209 LKLTNNIS-------------------DKHGFTILNSMHKYQPRFHIVR-----ANDILKLPYST 249

  Fly  1151 ------------AVVYYRKE------ID--------------RQRKRELSKKPVIEVRN------ 1177
                        ||..|:.:      ||              |:.||:....|.:.:..      
Mouse   250 FRTYVFPETDFIAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPTLRLYEEHCKPE 314

  Fly  1178 ----ESDAS--DASVRQKKIETPAEGPTPGKRIKLKADEPP 1212
                |||||  |....::...:|:..|:|.:..:.:|:|.|
Mouse   315 RDGAESDASSCDPPPAREPPPSPSAAPSPLRLHRARAEEKP 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241
Tbx2NP_033350.2 T-box_TBX2_3-like 103..287 CDD:410314 35/243 (14%)
TBX 305..380 CDD:432659 12/51 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 313..449 12/43 (28%)
Repression domain 1 (RD1). /evidence=ECO:0000250 518..602
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 640..687
Blue background indicates that the domain is not in the aligned region.

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