DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ocm and Tbx1

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001360867.1 Gene:Tbx1 / 21380 MGIID:98493 Length:529 Species:Mus musculus


Alignment Length:548 Identity:111/548 - (20%)
Similarity:174/548 - (31%) Gaps:215/548 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly  1604 TRIHSVMQVAEERQKV--VKLQFFPNAPYDAF--------VTPSSKKKIYFGPLSLDMPPPVLVL 1658
            :|..:|....::..||  |.:|....|.:|.|        ||.:.::          |.|...|.
Mouse   131 SRAAAVKAPVKKNPKVASVSVQLEMKALWDEFNQLGTEMIVTKAGRR----------MFPTFQVK 185

  Fly  1659 LQSVDRK---MMLREVYQREHSIPVQRHRRSMAF----WVL------QINGQVHFEIDTESTAKL 1710
            |..:|..   |:|.:.      :||...|...||    |::      ...|:||:..|  |.||.
Mouse   186 LFGMDPMADYMLLMDF------VPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPD--SPAKG 242

  Fly  1711 AAQQKNAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVVVIDSDEEDDDGERQLVIDEQDDEQ--A 1773
            |...|..:    ..:.||:.:.|   ::.|..     ::::|..........:.:|.:.|.:  |
Mouse   243 AQWMKQIV----SFDKLKLTNNL---LDDNGH-----IILNSMHRYQPRFHVVYVDPRKDSEKYA 295

  Fly  1774 ETDVKQEV-ERTGFTIQTLPSSGALQITISDSAETSSHPAKDVNTCHFSGGFMPFIANVPAKFGE 1837
            |.:.|..| |.|.||..|     |.|.......:.:|:|        |:.||             
Mouse   296 EENFKTFVFEETRFTAVT-----AYQNHRITQLKIASNP--------FAKGF------------- 334

  Fly  1838 TAPTTQFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVD 1902
                            ....||.               :|:.:.           ||.:.:....
Mouse   335 ----------------RDCDPED---------------WPRNHR-----------PGALPLVSAF 357

  Fly  1903 SQEK------TLPNETVQVVKNKKSIAITGIHKQVTKAA------SSTATVTAARAPVVKPQSTS 1955
            ::.:      |.||               |..|...:|.      |..|.:..|..|   ||  .
Mouse   358 ARSRNPVASPTQPN---------------GSDKDAAEARREFDRDSGPAALGDATHP---PQ--L 402

  Fly  1956 VSKVAPPIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQPVACDKPPLVSGSTL 2020
            :::|..|..||    |..||   |.|..:.||.| |.:|...:..|..|:|:             
Mouse   403 LARVLSPALPG----PGGLV---PLPGGSGGRHS-PPHADLRLEAPGASEPL------------- 446

  Fly  2021 PALVEPSARKSLPSK-PLAAGEHLRPRQSLPAKVT----------------ANP---------PA 2059
                     ...|.| |.||.:|....:|.||...                |:|         ||
Mouse   447 ---------HHHPYKYPAAAYDHYLGAKSRPAPYPLPGLRGHGYHPHAHPHAHPHHHHHPAVNPA 502

  Fly  2060 AARPDAASTSAQNLTNVSKAQLAKEEIC 2087
            ||   ||:.:|.|:.:.:.|.....:.|
Mouse   503 AA---AAAAAAANVYSSAAAPPGAYDYC 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 33/126 (26%)
Tbx1NP_001360867.1 T-box_TBX1_10-like 149..336 CDD:410313 52/258 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.