DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and T

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_033335.1 Gene:T / 20997 MGIID:98472 Length:436 Species:Mus musculus


Alignment Length:445 Identity:75/445 - (16%)
Similarity:135/445 - (30%) Gaps:148/445 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1754 EEDDDGERQLVIDEQDDEQ----AETDVKQEVERTG---FTIQTLPSSG----ALQITISDSAET 1807
            |:.|..||:|.:..::.|.    .|...:..|.:.|   |.:..:..||    |:...:.|....
Mouse    33 EKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVTA 97

  Fly  1808 SSHPAKDVN--------------TCHF----SGGFMPFIANVPAKFGETAPTTQF---------- 1844
            .:|..|.||              :|.:    |..|.......|..|.:...|.:.          
Mouse    98 DNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNS 162

  Fly  1845 ---LTPQVQVT---------TSQSGPET----LTSSSSSHLPASKSAYPKINESLQELFSSGVPP 1893
               ..|::.:.         ||...|||    :|:..:..:.|.|..|....::.          
Mouse   163 LHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAF---------- 217

  Fly  1894 GGITITKVDSQEKT-------LPNETVQVVKNKKSIAITGI---------HKQVTKAASSTATVT 1942
                   :|::|:.       .|.:..|...::....:.|.         |.|...:.|..:|..
Mouse   218 -------LDAKERNDHKDVMEEPGDCQQPGYSQWGWLVPGAGTLCPPASSHPQFGGSLSLPSTHG 275

  Fly  1943 AARAPVVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAAGRKSLPANAKTPVATPRQSQ-- 2005
            ..|.|.::...:|                       |.|:..|.|.|.|..|....|.....|  
Mouse   276 CERYPALRNHRSS-----------------------PYPSPYAHRNSSPTYADNSSACLSMLQSH 317

  Fly  2006 ---------------PVACDKPPLVSGSTLPAL-------VEPSARKSLPSKPLAA------GEH 2042
                           ||:.:..|....|..|:|       :.|.::.:..|..|.|      ..|
Mouse   318 DNWSSLGVPGHTSMLPVSHNASPPTGSSQYPSLWSVSNGTITPGSQTAGVSNGLGAQFFRGSPAH 382

  Fly  2043 LRPRQSLPAKVTANPPAAARPDAASTSAQNLTNVSKAQLAKEEICYGIMVAKDLP 2097
            ..|.....:..|::...:...:.|:|    :|::|.:|.   :....:::|...|
Mouse   383 YTPLTHTVSAATSSSSGSPMYEGAAT----VTDISDSQY---DTAQSLLIASWTP 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 26/149 (17%)
TNP_033335.1 T-box_TBXT 41..219 CDD:410328 30/194 (15%)
Blue background indicates that the domain is not in the aligned region.

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