DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx6

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_705952.2 Gene:tbx6 / 192294 ZFINID:ZDB-GENE-020416-5 Length:874 Species:Danio rerio


Alignment Length:408 Identity:85/408 - (20%)
Similarity:149/408 - (36%) Gaps:116/408 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1750 IDSDEEDDDGERQLVIDE-------------QDDEQAETDVK--------QEVERTGFTIQ---- 1789
            :.|..:..|.::.||:::             |....:||:|.        |.::.:|:|..    
Zfish   311 VSSHPDQTDSDQTLVLEQAFLTSEMPSSMESQQQTTSETNVNNALMDETGQMMDLSGYTSSFPTP 375

  Fly  1790 ------TLPSSGALQITIS--DSAETSSHPAKDVNTCHFSGGFMPFIANVP-AKF-GETAPTTQF 1844
                  ::|.|.::...:|  .|::.....|..:::.|    .||..:::| |:: |..:.|.. 
Zfish   376 QLSSHTSVPQSSSMYSVVSSTQSSDLELPQASSISSPH----SMPAYSSIPSAEYPGVNSSTAM- 435

  Fly  1845 LTPQVQVTTSQSGPETLTSSSSSHLPASKSAYPKI-NESLQELFSSGVPPGGITITKVDSQEKTL 1908
              |....:.|.|.| :::.|:||||..|.|.:..: .:..|:..|...|...             
Zfish   436 --PASTTSLSDSYP-SISHSTSSHLLQSSSYHSLLPTDQSQDNLSPHTPTNP------------- 484

  Fly  1909 PNETVQVVKNKKSIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSKVAPPIRPGATTQPKT 1973
            |.:::...:..: :.|.....||.....|:|..|   .|.| |..|..:...||::|.....|.:
Zfish   485 PFQSIPACQGTR-LTIDSGQNQVDDGGLSSANAT---TPAV-PNPTQTAFPFPPVQPNNDPDPTS 544

  Fly  1974 -LVRLYPKPALAAGRKS----LPANA---KTPVATP----RQSQP-----------VACDKPPL- 2014
             ..:..|:.||...:.|    :|..:   .||.|.|    .||.|           .|...||: 
Zfish   545 PSCQSLPQSALPYQQVSQCNQIPTPSDPNTTPTAFPFPPSEQSTPNSIMVSSNPNTTAFPFPPVQ 609

  Fly  2015 ------VSGSTLPALVEPSARKSLP----------SKPLAAGEHLRPRQSLPAKVTANPPAA--- 2060
                  .||.:...:.:.|...::|          |.|..:..|..|.||:|.  |.:|..|   
Zfish   610 QQLNLSTSGPSSFPVSQSSGLNAIPNPVHPTTGSFSFPSTSAIHQGPMQSVPN--TLHPSTAYTF 672

  Fly  2061 ---------ARPDAASTS 2069
                     ..|:.|.||
Zfish   673 PSSLPKHTGPLPNPAPTS 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx6NP_705952.2 TBOX 62..247 CDD:238106
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..396 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..453 6/28 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..551 18/102 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..626 13/62 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 664..695 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 720..776
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574473
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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