DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx-35

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_495059.2 Gene:tbx-35 / 191239 WormBaseID:WBGene00006554 Length:325 Species:Caenorhabditis elegans


Alignment Length:368 Identity:66/368 - (17%)
Similarity:122/368 - (33%) Gaps:110/368 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1232 YSLNTASVDVLAPDMAKEATTSAAATGSTHGSTDTNSANVCTFYNDVVKNMNTLVSKKMQDIDLA 1296
            ||:||.|..:|:.||      ....|...|     ||.....|:.|:::             .:.
 Worm     5 YSMNTPSPSMLSFDM------DIPITAFLH-----NSDVFQLFHPDIME-------------QVV 45

  Fly  1297 LQRESKIIPSPNEEIL-----CIIK---------------------WTNF--LAAFESGFVFIWD 1333
            :.:|....|:|:..:|     |:.|                     ||.:  ::..:...||:..
 Worm    46 VNKERVFFPTPSFNVLNLESDCLYKMSLRFDKTNNKRFQFNRQTKQWTEYDKVSNHKESEVFVHP 110

  Fly  1334 VQMKTHNFLAATTTNLMPSVCGAIAVVNTKFAPDPQALPLMARMLMNSMRNEKTNRLAVVMQGR- 1397
            .:::|                          ..|....|:...:.:.::|:.:::.: :.::.: 
 Worm   111 SEIRT--------------------------GDDWMKSPVEFFIKVTNLRSSESDEV-ICLESQC 148

  Fly  1398 --QSFWLVKGFLRHMQG--NACTKPTPMTHPLLT----------------KKINVLCSLLVKQRV 1442
              |...|::...|...|  .|...|..:...|||                ..:|...|...|::.
 Worm   149 KYQPTLLIQKVFRDCFGCFQAHGPPVEIKFALLTFIATTRYCSRRIADIKSSLNPFSSQDTKKKN 213

  Fly  1443 RENEKKTLGDGSGAPYEVLAGDVSPQTSLLMKNRSRDLKRKSQADERLLPSGP--SMTKSSKPSA 1505
            :.|..|.:......|.|..:...|.....|.|   .||..||..   ||...|  |...::..|:
 Worm   214 KRNTLKAVSQEENQPIENSSFHQSFSNQYLSK---PDLDLKSTT---LLQIAPDHSFEPTNFVSS 272

  Fly  1506 GGYPIAASVATSTTSAFASSS--GKSTPVCTAKTNSASTKNKS 1546
            ..:|...|:....:....|||  ..|.|..|.:.|:.:..|::
 Worm   273 SHFPCWDSIFCQQSFPTPSSSPYSDSLPHFTNEWNTPTFYNEN 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx-35NP_495059.2 TBOX 23..215 CDD:214656 32/236 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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