DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx-39

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_502851.1 Gene:tbx-39 / 190678 WormBaseID:WBGene00006558 Length:396 Species:Caenorhabditis elegans


Alignment Length:377 Identity:75/377 - (19%)
Similarity:122/377 - (32%) Gaps:114/377 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1056 QTQAVETLPLKTESKQEPPPANSLFKDESPLKRSNELNKIFNYF----RSRPDVCRRAISIPKNS 1116
            |.|...|:..:...||..|....:..::.|.....|||  ||..    :||..|   .:||.|..
 Worm     4 QAQFNVTMAEEDRWKQWYPNMEMIVNNKGPKLIFPELN--FNITGLEEKSRYVV---LLSIEKYD 63

  Fly  1117 YQRLNQRRA----DRVRHQIAREESLK----------TNEMLKMRIQ---GAVVYYRKEIDRQRK 1164
            ..|...|..    .:|||...:|:.:|          ..|::|..|:   ..:..::|.:|:...
 Worm    64 NIRYGYRNGKWGPSKVRHATKKEQEIKYFLHPDGTKLGKELMKETIKFDTVRITNHKKFMDKDNV 128

  Fly  1165 --RELSKK--PVIEVRNESDASDASVRQKKIETPAEGPTPGKRIKLKADEPPAQEKKAHMLDIQV 1225
              .|...|  ||:.|:|.::...|:                                 |.:.::|
 Worm   129 FFVETMHKYVPVLTVKNITNVESAN---------------------------------HSMRMEV 160

  Fly  1226 PRIAACYSLNTASVDVLAPDMAKEATTSAAATGSTHGSTDTNSANVCTFYNDVVKNMNTLVSKKM 1290
            .:.......|..|:........|.:|......|..                   |..||      
 Worm   161 AQFFPVTVYNQESIGNWKSKFHKNSTYGNRLDGGN-------------------KRKNT------ 200

  Fly  1291 QDIDLALQRESKIIPSPNE------EILCIIKWT-NFLAAFESGFVFIWDVQMKTHNFLAATTTN 1348
               |.:.:|.||  .|.||      :||.:...: |:..:..||.:.. ::....|.|.:.:..|
 Worm   201 ---DSSEERTSK--RSKNETEIAVSDILQVASQSENYNESTNSGRLQN-EISSSIHQFPSTSYQN 259

  Fly  1349 LMPSVCGAIAVVNTKFAPDPQALPLMARMLMNSMRNE-----KTNRLAVVMQ 1395
            ..|.   |...|||     |.........|.:.:.|:     |.||:|..:|
 Worm   260 QYPH---AYPTVNT-----PPIYVQQFTALFDEIHNQFDPKTKQNRVAKNVQ 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx-39NP_502851.1 T-box 9..180 CDD:279278 39/208 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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