DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx-33

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_499506.2 Gene:tbx-33 / 190493 WormBaseID:WBGene00006552 Length:420 Species:Caenorhabditis elegans


Alignment Length:320 Identity:54/320 - (16%)
Similarity:108/320 - (33%) Gaps:86/320 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   325 REHHINDSDSQDDKDKLLEPMGHDGQVTSHSMPPPMDMPAVPEALQRLRTVAERRQYLQRCKNHK 389
            :::|.|......|.........|..::.:.::..|.|:......|...:.|....:.:....|:|
 Worm    56 QQYHQNFQGGYSDPFTYQNQYAHQPKIVTVTLQDPQDLWKELHYLSNEQNVLNNGRKIFPALNYK 120

  Fly   390 MGIINNEANVYRELQRKQRQRKVKIGAMQALQASDSQMPFTRQGWQAASYVATEHSKYYYQVIQV 454
            :..:|.|:|...|:..::         |...|...|...::|:..|:...:|.:..|.:  |.:.
 Worm   121 VEHLNPESNYKVEILLRR---------MVPYQIQYSNGSWSRKNVQSKKTIAMKTEKVF--VGEF 174

  Fly   455 DGEMVRLPGAQ---------GNNLKREKSPY--LSRLSRKEQEELKCSEQCLDARIQQELKVIPT 508
            .|:.:...|..         |::.|::.:||  :|...::|.:.....::.....:..|.|.||.
 Worm   175 TGQDIMRTGLDLSDVKVFNIGSDNKKKVTPYEEMSDAEKREYDTQYSKKKTSMLEVSNECKYIPV 239

  Fly   509 RVSPPRNPKILNQYPLPAIFRPCPLSKKPLQRPLDDDTAALLLAGGSMAVVSMPNVELDVMPQLG 573
                    .|:|:.                                      :||.||.::.:..
 Worm   240 --------LIINEI--------------------------------------LPNQELRLVGEFE 258

  Fly   574 RPLDEIA--KRYLQHILPHHDITREWAEFSVSTLQ--APPATMKDAEEQASQTPAGRRKS 629
            ..:.:.|  ..|..||              |..|:  |.|.:..||:::|.|.....|.|
 Worm   259 NEITQFATVSSYKNHI--------------VKALRTAANPTSRGDAKQEAVQVGKQWRSS 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx-33NP_499506.2 TBOX 83..296 CDD:214656 47/283 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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