DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx-31

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_508308.1 Gene:tbx-31 / 183272 WormBaseID:WBGene00006550 Length:747 Species:Caenorhabditis elegans


Alignment Length:649 Identity:131/649 - (20%)
Similarity:207/649 - (31%) Gaps:191/649 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1564 DVDELQIPELHQTDHRWVVLDIFDDFSHIFV----PSFSDMISLTRIHSV-------------MQ 1611
            |.:|:...:.:||..||:...::  |..|.:    |.....:.|..:|:.             ::
 Worm    97 DTEEIVHSDGYQTGARWMKTGVY--FPKIGISKEQPDKERCLLLESLHAYFPVLVFTTSSGISLE 159

  Fly  1612 VAEERQKVVKLQFFPNAPYDAFVTPSSKKKI--YFGPLSLDMPPPVLVLLQSVDRKMMLREVYQR 1674
            |....||.|......|..    |....|:|:  ..||.:...|..:....:.|     :.|||..
 Worm   160 VPVWSQKFVTTMTSSNRS----VKRREKRKLEETAGPAAKKTPDIIETTPEDV-----VPEVYNA 215

  Fly  1675 EHSIPVQRHRRSMAFWVLQINGQVHFEIDTESTAKLAAQQ------------------------K 1715
            ::            |:.:|.|..:..|  ::.::.||.||                        .
 Worm   216 QY------------FYQMQNNTVISSE--SKFSSPLALQQDLTEDFGTFAQLDAHFNVSVQSCSS 266

  Fly  1716 NAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVV-VIDSDEEDDDGERQLVIDEQD---DEQAETD 1776
            :::.:|..|......|..|...:||.:|...|. .||....:.|   |..:|:|.   |....|.
 Worm   267 SSLSSPAALKHDSTVSSDSDFDDKNSEEFDAVFEYIDQQFSNHD---QNPMDQQSKSIDLNQTTW 328

  Fly  1777 VKQEVERTGFTIQTLPSSGALQITISDSAETSS--HPAKDVNTC--HFSGGFMPFIANVPAK--- 1834
            ..|.:...|: :.|..|..||. ..|.::|.||  ...|....|  .|...|.........|   
 Worm   329 APQSINNPGY-LSTASSPAALN-QDSSASEKSSIVRDKKSDENCLDEFDRVFNELDQQFTPKEDQ 391

  Fly  1835 --------------FGETAPTTQFLTPQV-----QVTTSQSGPETLTSSSSSHLPASKSAYPKIN 1880
                          ...:..:.||:.|::     ......|.|..|:....|.||......|.:.
 Worm   392 VQDLSNCTTWNQEPINNSIQSNQFINPELFYFIFHKCLIISWPSCLSCCRGSILPQHLRTPPLVP 456

  Fly  1881 ESLQELFSSGV-PP------GGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKAASST 1938
            .|...:.|..| ||      |..|::...|   |..|.|:....:..|         .|.:.|:|
 Worm   457 ISQLLIISPLVLPPYHNFTTGSATVSPFAS---TPANMTIFNFTSDSS---------TTYSNSTT 509

  Fly  1939 ATV--TAARAPVVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAAGR-------------- 1987
            |.|  ..|..|     ..|...:||.:.          :.|:..|.:.:||              
 Worm   510 AQVFPDVANTP-----DLSYFNIAPAVD----------LSLFIDPFVQSGRDLSIERSIRNFTNT 559

  Fly  1988 -KSLPANAKTPVATPRQSQPVA-----C-------DKPP-----LVSGSTLPALVEPSARKSLPS 2034
             |......||.:.|.:.::|:.     |       |||.     .:||..|..|:..|......|
 Worm   560 LKKAHRQKKTAILTFQSTEPMQLEFKYCTKMLLRTDKPVGNFSIQLSGPYLEHLLNLSHHLCRFS 624

  Fly  2035 K-PLAAGEHLRPRQSLPAKVTANPPAAARPDAASTSAQNLTNVSKAQLAKEEICYGIMVAKDLP 2097
            : .|....|. ||.|..:..:...||...|:    :.:|:|.              |.|.||.|
 Worm   625 EYNLFVKAHF-PRGSYGSLTSMTGPAVEIPE----TQENITI--------------IWVKKDFP 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx-31NP_508308.1 TBOX 15..198 CDD:214656 21/106 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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