DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbx-2

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_001370674.1 Gene:tbx-2 / 175698 WormBaseID:WBGene00006543 Length:423 Species:Caenorhabditis elegans


Alignment Length:469 Identity:93/469 - (19%)
Similarity:157/469 - (33%) Gaps:142/469 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 PTKSPAQVAASEDVPTPATPSKEQSGQTSTCSSAEKTDKVEKVGGGSKFLDMLISK--------V 253
            |..||.:.....|.|......:|...|.|.|.:                 :|:|:|        .
 Worm    47 PVGSPPEDDGVTDDPKVELDERELWQQFSQCGT-----------------EMVITKSGRRIFPAY 94

  Fly   254 RVK---------NFARENNMPAEPSAVTFCTSE--DEGSADFVGFDESVHQPGMLLTPLV-PNNC 306
            |||         .|...:.:||:.....|..|.  ..|.||          |.|..|..: |::.
 Worm    95 RVKISGLDKKSQYFVMMDLVPADEHRYKFNNSRWMIAGKAD----------PEMPKTLYIHPDSP 149

  Fly   307 KTTEGNSAFVSESLDAYMREHHINDSDSQDDKDKLLEPMGHDGQVTSHSMPPPMDMPAVPEALQR 371
            .|.|   .::|:..:.    |.:..:::..||.      |:....:.|...|             
 Worm   150 STGE---HWMSKGANF----HKLKLTNNISDKH------GYTILNSMHKYQP------------- 188

  Fly   372 LRTVAERRQYLQRCKN-HKMGIINNEANVYRELQ-------RKQRQRKVKIGAMQALQASDSQMP 428
                   |.::.||.: |.:........|:||.:       :.::..::||          ...|
 Worm   189 -------RLHVVRCADRHNLMYSTFRTFVFRETEFIAVTAYQNEKVTELKI----------ENNP 236

  Fly   429 FTRQGWQAASYVATEHSKYYYQVIQVDGEMVRLPGAQGNNLKREKSPYLSRLSRKEQEEL--KCS 491
            |.: |::.|.....|..:   |:.:::|:..:.|..:..:|... ||:.|..:.::.|..  || 
 Worm   237 FAK-GFRDAGAGKREKKR---QLHRMNGDATQSPPGKTASLPTH-SPHPSESNSEDDEPTLKKC- 295

  Fly   492 EQCLDARIQQELKVIPT--RVSPPRNPKILNQYPL--PAIFRPCPLSKKPLQRPLDDDTAALLLA 552
                    :.|....||  .:|....|.:...:||  |....|.|:.......|:|      |||
 Worm   296 --------KPEPSQTPTTSSLSTSTTPTLSAHHPLRSPQFCIPPPIDMMYQNMPMD------LLA 346

  Fly   553 GGSMAVVSMPNVELDVMPQLGRPLDEIAKRYLQHILPHHDITREWAEFSVSTLQAPPATMKDAEE 617
            ...||.         :.||....|:..|.  ...:|..| :.:..:|..|.      ||.:|:||
 Worm   347 HWQMAT---------LFPQFSMALNSPAA--AASLLSKH-LAKASSECKVE------ATSEDSEE 393

  Fly   618 QASQTPAGRRKSFT 631
            .........:||.|
 Worm   394 AEKPEVKKEQKSVT 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbx-2NP_001370674.1 T-box_TBX2_3-like 59..243 CDD:410314 45/254 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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