DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Eomes

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_034266.2 Gene:Eomes / 13813 MGIID:1201683 Length:707 Species:Mus musculus


Alignment Length:542 Identity:97/542 - (17%)
Similarity:166/542 - (30%) Gaps:174/542 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1468 QTSLLMKNRSRDLKRKSQADERLLPSGPSMTKSSKPSAGGYPIAASVATSTTSAFASSSGKSTPV 1532
            ||.:::..:.|          |:.|..........|:| .|.:...|..:..:.:....||....
Mouse   286 QTEMIITKQGR----------RMFPFLSFNINGLNPTA-HYNVFVEVVLADPNHWRFQGGKWVTC 339

  Fly  1533 CTAKTNSASTK----NKSSATG---IRSNIEFRKV--------NHNDVDELQIPELHQTDHRWVV 1582
            ..|..|....|    .:|..||   :|..|.|.|:        |:|:...:.:..||:...|..:
Mouse   340 GKADNNMQGNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIVLQSLHKYQPRLHI 404

  Fly  1583 LDIFDD-FSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQFFPNA-------PYDAFVTPSSK 1639
            :::.:| ...:..||.:...:.:....:...|.:...:.:|:...|.       .||:..|.|..
Mouse   405 VEVTEDGVEDLNEPSKTQTFTFSETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDSMYTASEN 469

  Fly  1640 KKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSI-PVQRHRRSMAFWVLQINGQVHFEID 1703
            .::  .|...|.|                     |.|.| |..|:            |..:|..:
Mouse   470 DRL--TPSPTDSP---------------------RSHQIVPGGRY------------GVQNFFPE 499

  Fly  1704 TESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVVVIDSDEEDDDGERQLVIDEQ 1768
            ........|:..|...|.|..|.|..|.|                   |:|..:..:|.||...|
Mouse   500 PFVNTLPQARYYNGERTVPQTNGLLSPQQ-------------------SEEVANPPQRWLVTPVQ 545

  Fly  1769 DDEQAETDV-KQEVERTGFT-----IQTLPSSGALQITISDSAETSSHPAKDVNTCHFSGGF--- 1824
            .....:.|: ..|.|.|..|     |::||                      :.|.|..|.:   
Mouse   546 QPVTNKLDIGSYESEYTSSTLLPYGIKSLP----------------------LQTSHALGYYPDP 588

  Fly  1825 -MPFIAN------VPAKFGETAPTTQFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAYPKINES 1882
             .|.:|.      ...|.....|.|..::|.|                   .|..:.|..|:.| 
Mouse   589 TFPAMAGWGGRGAYQRKMAAGLPWTSRMSPPV-------------------FPEDQLAKEKVKE- 633

  Fly  1883 LQELFSSGV--PPGGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKAAS-STATVTAA 1944
              |:.||.:  ||   :|..:||.:                   :|::....|... |.:|.:..
Mouse   634 --EISSSWIETPP---SIKSLDSSD-------------------SGVYNSACKRKRLSPSTPSNG 674

  Fly  1945 RAPVVKPQSTSVSKVAPPIRPG 1966
            .:|.:|.:..:..:.:.....|
Mouse   675 NSPPIKCEDINTEEYSKDTSKG 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 6/35 (17%)
EomesNP_034266.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..125
T-box_TBR2 268..458 CDD:410331 32/182 (18%)
T-box_assoc 484..705 CDD:465042 56/310 (18%)
Required for transcription activation. /evidence=ECO:0000250 592..707 25/149 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 642..689 11/68 (16%)
Blue background indicates that the domain is not in the aligned region.

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