DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and Eomes

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:NP_034266.2 Gene:Eomes / 13813 MGIID:1201683 Length:707 Species:Mus musculus


Alignment Length:542 Identity:97/542 - (17%)
Similarity:166/542 - (30%) Gaps:174/542 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1468 QTSLLMKNRSRDLKRKSQADERLLPSGPSMTKSSKPSAGGYPIAASVATSTTSAFASSSGKSTPV 1532
            ||.:::..:.|          |:.|..........|:| .|.:...|..:..:.:....||....
Mouse   286 QTEMIITKQGR----------RMFPFLSFNINGLNPTA-HYNVFVEVVLADPNHWRFQGGKWVTC 339

  Fly  1533 CTAKTNSASTK----NKSSATG---IRSNIEFRKV--------NHNDVDELQIPELHQTDHRWVV 1582
            ..|..|....|    .:|..||   :|..|.|.|:        |:|:...:.:..||:...|..:
Mouse   340 GKADNNMQGNKMYVHPESPNTGSHWMRQEISFGKLKLTNNKGANNNNTQMIVLQSLHKYQPRLHI 404

  Fly  1583 LDIFDD-FSHIFVPSFSDMISLTRIHSVMQVAEERQKVVKLQFFPNA-------PYDAFVTPSSK 1639
            :::.:| ...:..||.:...:.:....:...|.:...:.:|:...|.       .||:..|.|..
Mouse   405 VEVTEDGVEDLNEPSKTQTFTFSETQFIAVTAYQNTDITQLKIDHNPFAKGFRDNYDSMYTASEN 469

  Fly  1640 KKIYFGPLSLDMPPPVLVLLQSVDRKMMLREVYQREHSI-PVQRHRRSMAFWVLQINGQVHFEID 1703
            .::  .|...|.|                     |.|.| |..|:            |..:|..:
Mouse   470 DRL--TPSPTDSP---------------------RSHQIVPGGRY------------GVQNFFPE 499

  Fly  1704 TESTAKLAAQQKNAIGTPPGLNVLKIPSQLSVEIEKNQDEVPPVVVIDSDEEDDDGERQLVIDEQ 1768
            ........|:..|...|.|..|.|..|.|                   |:|..:..:|.||...|
Mouse   500 PFVNTLPQARYYNGERTVPQTNGLLSPQQ-------------------SEEVANPPQRWLVTPVQ 545

  Fly  1769 DDEQAETDV-KQEVERTGFT-----IQTLPSSGALQITISDSAETSSHPAKDVNTCHFSGGF--- 1824
            .....:.|: ..|.|.|..|     |::||                      :.|.|..|.:   
Mouse   546 QPVTNKLDIGSYESEYTSSTLLPYGIKSLP----------------------LQTSHALGYYPDP 588

  Fly  1825 -MPFIAN------VPAKFGETAPTTQFLTPQVQVTTSQSGPETLTSSSSSHLPASKSAYPKINES 1882
             .|.:|.      ...|.....|.|..::|.|                   .|..:.|..|:.| 
Mouse   589 TFPAMAGWGGRGAYQRKMAAGLPWTSRMSPPV-------------------FPEDQLAKEKVKE- 633

  Fly  1883 LQELFSSGV--PPGGITITKVDSQEKTLPNETVQVVKNKKSIAITGIHKQVTKAAS-STATVTAA 1944
              |:.||.:  ||   :|..:||.:                   :|::....|... |.:|.:..
Mouse   634 --EISSSWIETPP---SIKSLDSSD-------------------SGVYNSACKRKRLSPSTPSNG 674

  Fly  1945 RAPVVKPQSTSVSKVAPPIRPG 1966
            .:|.:|.:..:..:.:.....|
Mouse   675 NSPPIKCEDINTEEYSKDTSKG 696

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
EomesNP_034266.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 27..125
TBOX 269..462 CDD:238106 33/186 (18%)
T-box_assoc 484..705 CDD:292794 56/310 (18%)
Required for transcription activation. /evidence=ECO:0000250 592..707 25/149 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 642..689 11/68 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831505
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.830

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