DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbxtb

DIOPT Version :9

Sequence 1:NP_001188998.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_001343633.3 Gene:tbxtb / 100004296 ZFINID:ZDB-GENE-081028-48 Length:424 Species:Danio rerio


Alignment Length:476 Identity:82/476 - (17%)
Similarity:161/476 - (33%) Gaps:144/476 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1603 LTRIHSVMQVAEER----QKVVKLQFFPNAPYDAF--------VTPSSKKKIYFGPLSLDMPPPV 1655
            ||.:.:.:|...|:    ::.:|:....|..:..|        ||.:.::          |.|.:
Zfish    19 LTAVENELQAGSEKGDPTERELKVALDENELWQKFKALTNEMIVTKNGRR----------MFPVL 73

  Fly  1656 LVLLQSVDRKMMLREVYQREHSIPVQRHRRSMAFWVLQINGQ----------------------- 1697
            .|.:..:|...|...:..   .:|...||     | ..:||:                       
Zfish    74 KVNISGLDPNAMYSFLLD---FVPADNHR-----W-KYVNGEWVPGGKPEPQAPSCVYIHPDSPN 129

  Fly  1698 --VHFEIDTESTAKLAAQQK-NAIGT---------PPGLNVLKI------------PSQLSVEIE 1738
              .|:.....|.:|:....| |..|.         .|.::::::            |....:.:.
Zfish   130 FGAHWMKSCVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITTHAFPETQFIAVT 194

  Fly  1739 KNQ-DEVPPVVV---------IDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFTIQT--- 1790
            ..| :|:..:.:         :|:.|..|..|   :|::..:.|          ::|::..:   
Zfish   195 AYQNEEITSLKIKYNPFAKAFLDTKERSDHKE---IIEDVSESQ----------QSGYSQLSSWF 246

  Fly  1791 LPSSGALQITISDSAETSSHPAKDVNTCHFSGGFMPFIANVPAKFGETAPTTQFLTPQVQVTTSQ 1855
            |||:|:|..:.:..|:.:|  |..::|.|....:.....:..|.:    |:|     ....|.|.
Zfish   247 LPSAGSLCPSANPHAQLNS--ALSLSTSHGCERYSTLRGHRSAPY----PST-----YAHRTASP 300

  Fly  1856 SGPETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKK 1920
            :|... :||..|.||:..:.     .|||....|.|.|.|         ..:.||.......:..
Zfish   301 TGYSD-SSSCLSMLPSHDNW-----SSLQMSSHSSVLPMG---------HSSGPNSNTSQYTSLW 350

  Fly  1921 SIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAA 1985
            |:.         .::.|.:..::..:..::..:...|.:|.|:     |.|.:...||...|..|
Zfish   351 SVG---------NSSQSGSMSSSLGSQFLRGSAGHYSSLAHPL-----TAPSSGSPLYDTAASEA 401

  Fly  1986 GRKSLPANAKTPVATPRQSQP 2006
            ......|:.:.|.|....:.|
Zfish   402 SEYDTAAHTRLPTAWTHVAPP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_001188998.1 DUF4801 771..821 CDD:292677
tbxtbXP_001343633.3 TBOX 40..221 CDD:238106 27/199 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574522
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3585
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

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