DRSC/TRiP Functional Genomics Resources

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Protein Alignment ocm and tbxtb

DIOPT Version :10

Sequence 1:NP_611894.1 Gene:ocm / 37874 FlyBaseID:FBgn0266083 Length:2175 Species:Drosophila melanogaster
Sequence 2:XP_001343633.4 Gene:tbxtb / 100004296 ZFINID:ZDB-GENE-081028-48 Length:424 Species:Danio rerio


Alignment Length:476 Identity:81/476 - (17%)
Similarity:161/476 - (33%) Gaps:144/476 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1603 LTRIHSVMQVAEER----QKVVKLQFFPNAPYDAF--------VTPSSKKKIYFGPLSLDMPPPV 1655
            ||.:.:.:|...|:    ::.:|:....|..:..|        ||.:.::          |.|.:
Zfish    19 LTAVENELQAGSEKGDPTERELKVALDENELWQKFKALTNEMIVTKNGRR----------MFPVL 73

  Fly  1656 LVLLQSVDRKMMLREVYQREHSIPVQRHRRSMAFWVLQINGQ----------------------- 1697
            .|.:..:|...|...:..   .:|...||     | ..:||:                       
Zfish    74 KVNISGLDPNAMYSFLLD---FVPADNHR-----W-KYVNGEWVPGGKPEPQAPSCVYIHPDSPN 129

  Fly  1698 --VHFEIDTESTAKLAAQQK-NAIGT---------PPGLNVLKI------------PSQLSVEIE 1738
              .|:.....|.:|:....| |..|.         .|.::::::            |....:.:.
Zfish   130 FGAHWMKSCVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITTHAFPETQFIAVT 194

  Fly  1739 KNQ-DEVPPVVV---------IDSDEEDDDGERQLVIDEQDDEQAETDVKQEVERTGFTIQT--- 1790
            ..| :|:..:.:         :|:.|..|  .:.::.|..:.:|           :|::..:   
Zfish   195 AYQNEEITSLKIKYNPFAKAFLDTKERSD--HKDIIEDVSESQQ-----------SGYSQLSSWF 246

  Fly  1791 LPSSGALQITISDSAETSSHPAKDVNTCHFSGGFMPFIANVPAKFGETAPTTQFLTPQVQVTTSQ 1855
            |||:|:|..:.:..|:.:|  |..::|.|....:.....:..|.:    |:|     ....|.|.
Zfish   247 LPSAGSLCPSANPHAQLNS--ALSLSTSHGCERYSTLRGHRSAPY----PST-----YAHRTASP 300

  Fly  1856 SGPETLTSSSSSHLPASKSAYPKINESLQELFSSGVPPGGITITKVDSQEKTLPNETVQVVKNKK 1920
            :|... :||..|.||:..:.     .|||....|.|.|.|         ..:.||.......:..
Zfish   301 TGYSD-SSSCLSMLPSHDNW-----SSLQMSSHSSVLPMG---------HSSGPNSNTSQYTSLW 350

  Fly  1921 SIAITGIHKQVTKAASSTATVTAARAPVVKPQSTSVSKVAPPIRPGATTQPKTLVRLYPKPALAA 1985
            |:.         .::.|.:..::..:..::..:...|.:|.|:     |.|.:...||...|..|
Zfish   351 SVG---------NSSQSGSMSSSLGSQFLRGSAGHYSSLAHPL-----TAPSSGSPLYDTAASEA 401

  Fly  1986 GRKSLPANAKTPVATPRQSQP 2006
            .:....|:.:.|.|....:.|
Zfish   402 SQYDTAAHTRLPTAWTHVAPP 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ocmNP_611894.1 MGA_dom 771..821 CDD:464998
PRK12323 <1933..>2053 CDD:481241 14/74 (19%)
tbxtbXP_001343633.4 None
Blue background indicates that the domain is not in the aligned region.

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