DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop60B and CG7849

DIOPT Version :10

Sequence 1:NP_525120.1 Gene:Nop60B / 37873 FlyBaseID:FBgn0259937 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_610201.1 Gene:CG7849 / 35537 FlyBaseID:FBgn0033060 Length:317 Species:Drosophila melanogaster


Alignment Length:230 Identity:49/230 - (21%)
Similarity:81/230 - (35%) Gaps:63/230 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 NRDIKEYMKTGFINLDKPSN-PSSHEVVAWIKKILKVEKTGHSGTLDPKVTGCLIVCIDRATRLV 141
            ||.::.|...|.:.:...:| |.|..::          ::.|..           |..||.:.|.
  Fly   131 NRPVRVYHLIGHLGIATENNLPDSRVIM----------RSNHRH-----------VSADRISSLA 174

  Fly   142 KSQQSAGKEYVAIFKLHG----AVESVAKVRQGLEKLRGALFQRPPLISAVKRQLRVRTVYDSKL 202
            .|.|::.:.  .:|:|.|    ..|:.....:||  ||.|...:|             .||..||
  Fly   175 ASMQASHQR--KMFELCGVDLQTQEAYELACRGL--LRPADDSQP-------------VVYGIKL 222

  Fly   203 LDYDETRNMGVFWVSCEAGSYIRTMCVHLGLVLGVGGQMLELRRVRSGIQSERDGMVTMH-DVLD 266
            :.:|............|...|:.|:...:.|.|.......:||.||..           | ||.|
  Fly   223 IHFDRPHFTLELHAINETQEYLATLVHDMALDLRTVAHCSQLRCVRHA-----------HFDVTD 276

  Fly   267 AMWLYENHKDESMLRRVIKPL---EGLLVNHKRII 298
            ::..:..|     |..:||.|   ..:|..|.:::
  Fly   277 SLLRHAWH-----LPGIIKNLRQQRDILRAHPQLL 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop60BNP_525120.1 CBF5 54..379 CDD:273073 49/230 (21%)
CG7849NP_610201.1 PseudoU_synth_hTruB2_like 18..292 CDD:211345 46/214 (21%)

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