DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nop60B and LOC1281037

DIOPT Version :10

Sequence 1:NP_525120.1 Gene:Nop60B / 37873 FlyBaseID:FBgn0259937 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_320970.4 Gene:LOC1281037 / 1281037 VectorBaseID:AGAMI1_005050 Length:311 Species:Anopheles gambiae


Alignment Length:234 Identity:46/234 - (19%)
Similarity:80/234 - (34%) Gaps:69/234 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 NRDIKEYMKTGFINLDKPSNPSSHEVVAWIKKILKVEKTGHSGTLDPKVTGCLIVCIDRATRLVK 142
            ||.::.|..|||:.                       |...:...|.:||.       |||....
Mosquito   124 NRPLRVYRVTGFLG-----------------------KATETHFADSRVTA-------RATISHI 158

  Fly   143 SQQSAGKEYVAI--------FKLHGA-VESVAKVRQGLEKLRGALFQRPPLISAVKRQLRVRTVY 198
            ..:..|:...||        |:|.|. ::|.|.....   .:|.:  ||       ...|:..:|
Mosquito   159 GSEKIGRLLAAIQASHQRKMFELSGIDIQSQAAYELA---CKGTI--RP-------ADNRLPMIY 211

  Fly   199 DSKLLDYDETRNMGVFWVSC----EAGSYIRTMCVHLGLVLGVGGQMLELRRVRSGIQSERDGMV 259
            ..:|.:|.:.    .|.:..    |..:|:..:...:|:.|........:|.:|.|.....|.::
Mosquito   212 GIRLAEYRKP----FFTIEIHAINETEAYLGELIHEIGINLKSCAHCTGVRCIRHGHFLLEDSLL 272

  Fly   260 ----TMHDVLDAM----WLYENHKDESMLRRVIKPLEGL 290
                .:.::|..|    .|...|.|  ||::....|:|:
Mosquito   273 KKDWNLQNILSGMAHTNKLVNQHPD--MLQQSSSSLQGM 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nop60BNP_525120.1 CBF5 54..379 CDD:273073 46/234 (20%)
LOC1281037XP_320970.4 None

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